RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TTLL9Q3SXZ7 439 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 TMEM31Q5JXX7 168 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 LRRC8EQ6NSJ5 796 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 KYAT3Q6YP21 454 aaKnown RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 ABI3BPQ7Z7G0 1075 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 CMC1Q7Z7K0 106 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 CLEC14AQ86T13 490 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 TBC1D1Q86TI0 1168 aaPredicted RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 DCP2Q8IU60 420 aaKnown RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 CEP97Q8IW35 865 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 NKAPQ8N5F7 415 aaKnown RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 TMEM105Q8N8V8 129 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 PNPLA1Q8N8W4 532 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 RASGEF1AQ8N9B8 481 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 ACVR1CQ8NER5 493 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 RLN3Q8WXF3 142 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 INPP5DQ92835 1189 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 FUBP1Q96AE4 644 aaKnown RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 UBXN10Q96LJ8 280 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 TSNARE1Q96NA8 513 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 DUSP15Q9H1R2 295 aaPredicted RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 CAB39LQ9H9S4 337 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 MBD1Q9UIS9 605 aaPredicted RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 TRMT6Q9UJA5 497 aaKnown RBP14.68□□□□□ -0.06
VPS18-202ENST00000558474 GRID1Q9ULK0 1009 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 PRSS21Q9Y6M0 314 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 CEP192Q8TEP8 1941 aa14.68□□□□□ -0.06
VPS18-202ENST00000558474 DOCK9Q9BZ29 2069 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 A6NNZ2 444 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 TNFRSF10CO14798 259 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 SGTAO43765 313 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 NUAK1O60285 661 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 KLHL2O95198 593 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 F7P08709 466 aaPredicted RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 ZNF37AP17032 561 aaPredicted RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 NR1D1P20393 614 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 SAT1P21673 171 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 HTR1BP28222 390 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 CNR2P34972 360 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 PXNP49023 591 aaPredicted RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 TIAL1Q01085 375 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS18-202ENST00000558474 RPL6Q02878 288 aaKnown RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 OVGP1Q12889 678 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 PTK2BQ14289 1009 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 FAM83EQ2M2I3 478 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 KHDC1Q4VXA5 237 aaKnown RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 PLEKHS1Q5SXH7 462 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 IQCHQ86VS3 1027 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 KRT222Q8N1A0 295 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 C4orf33Q8N1A6 199 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 CLDN19Q8N6F1 224 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 SCARF2Q96GP6 870 aaPredicted RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 PDLIM5Q96HC4 596 aaKnown RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 GPR21Q99679 349 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 CCM2Q9BSQ5 444 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 IQCGQ9H095 443 aaKnown RBP14.67□□□□□ -0.06
VPS18-202ENST00000558474 VPS11Q9H270 941 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 PCMTD2Q9NV79 361 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 ATXN10Q9UBB4 475 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 SLC17A4Q9Y2C5 497 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 PIKFYVEQ9Y2I7 2098 aa14.67□□□□□ -0.06
VPS18-202ENST00000558474 MAP3K13O43283 966 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 NIPSNAP2O75323 286 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 APOA4P06727 396 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 LTA4HP09960 611 aaKnown RBP14.66□□□□□ -0.06
VPS18-202ENST00000558474 ENO3P13929 434 aaPredicted RBP14.66□□□□□ -0.06
VPS18-202ENST00000558474 DGKAP23743 735 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 AOAHP28039 575 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 OAS2P29728 719 aaKnown RBP14.66□□□□□ -0.06
VPS18-202ENST00000558474 RGS4P49798 205 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 ATP6V0D1P61421 351 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 NFATC4Q14934 902 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 CCDC153Q494R4 210 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 AGAP9Q5VTM2 703 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 KLC3Q6P597 504 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 TMEM220Q6QAJ8 160 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 GCNT7Q6ZNI0 430 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 OTOAQ7RTW8 1153 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 MAML2Q8IZL2 1156 aaPredicted RBP14.66□□□□□ -0.06
VPS18-202ENST00000558474 FAM160A2Q8N612 972 aaPredicted RBP14.66□□□□□ -0.06
VPS18-202ENST00000558474 FAM76AQ8TAV0 307 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 CD200R1Q8TD46 325 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 DNASE2BQ8WZ79 361 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 NELL1Q92832 810 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 ZBTB9Q96C00 473 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 SGF29Q96ES7 293 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 BMFQ96LC9 184 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 ORAI3Q9BRQ5 295 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 C1QTNF1Q9BXJ1 281 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 OR2AG1Q9H205 316 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 EBF2Q9HAK2 575 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 OGFRQ9NZT2 677 aa14.66□□□□□ -0.06
VPS18-202ENST00000558474 POM121BA6NF01 834 aa14.65□□□□□ -0.06
VPS18-202ENST00000558474 FOXO6A8MYZ6 492 aa14.65□□□□□ -0.06
VPS18-202ENST00000558474 GOLGA8RI6L899 631 aa14.65□□□□□ -0.06
VPS18-202ENST00000558474 LIN7AO14910 233 aaPredicted RBP14.65□□□□□ -0.06
VPS18-202ENST00000558474 KMOO15229 486 aa14.65□□□□□ -0.06
VPS18-202ENST00000558474 PHGDHO43175 533 aaKnown RBP14.65□□□□□ -0.06
VPS18-202ENST00000558474 LILRB5O75023 590 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms