RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 HNRNPRO43390 633 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 JCHAINP01591 159 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 PCK1P35558 622 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 VAV2P52735 878 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 DRG2P55039 364 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 ITGA1P56199 1179 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 GSDMDP57764 484 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 CDK18Q07002 472 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 CT47A1Q5JQC4 288 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 DNTTIP2Q5QJE6 756 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 CISD2Q8N5K1 135 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 ZSCAN5AQ9BUG6 496 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 CHST8Q9H2A9 424 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 TMEM63CQ9P1W3 806 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 BRAFP15056 766 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 PPP1CAP62136 330 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 TUBB4BP68371 445 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 HSD11B2P80365 405 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 LAMB3Q13751 1172 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 TUBB2AQ13885 445 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 KYNUQ16719 465 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 TMTC4Q5T4D3 741 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 AGAP9Q5VTM2 703 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 OR8K5Q8NH50 307 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ADAMTS17Q8TE56 1095 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 GLYATL1Q969I3 302 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 MARVELD3Q96A59 401 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 SGSM3Q96HU1 749 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 CD180Q99467 661 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 SMAD5Q99717 465 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 MAP3K3Q99759 626 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 TUBB2BQ9BVA1 445 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ADGRE3Q9BY15 652 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ILKAPQ9H0C8 392 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ZFYVE1Q9HBF4 777 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 RAD18Q9NS91 495 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 KCND1Q9NSA2 647 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 SEMA5BQ9P283 1151 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 C5AR2Q9P296 337 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 AMACRQ9UHK6 382 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 SCINQ9Y6U3 715 aa17.46■□□□□ 0.39
TSPAN3-204ENST00000558394 ARHGAP10A1A4S6 786 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 VEGFDO43915 354 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 CDK14O94921 469 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 PRLP01236 227 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 RAB40ALP0C0E4 278 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 IL4RP24394 825 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 PER3P56645 1201 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 GPS2Q13227 327 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 RAPSNQ13702 412 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 GTF2H3Q13889 308 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 KRT81Q14533 505 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 PLEKHN1Q494U1 663 aaPredicted RBP17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 VWA5B1Q5TIE3 1220 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 LYPLAL1Q5VWZ2 237 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 PDPK2PQ6A1A2 396 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 ALG1LQ6GMV1 187 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 CPT1BQ92523 772 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 CLIP3Q96DZ5 547 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 RUBCNLQ9H714 662 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 FANCEQ9HB96 536 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 MRPL47Q9HD33 250 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 TCFL5Q9UL49 500 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 B3GNT3Q9Y2A9 372 aa17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 DIDO1Q9BTC0 2240 aaKnown RBP17.45■□□□□ 0.38
TSPAN3-204ENST00000558394 TLCD2A6NGC4 264 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 F5H423 210 aaPredicted RBP17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 MATN3O15232 486 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 SLC4A1P02730 911 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 ALPPP05187 535 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 FECHP22830 423 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 IL1R2P27930 398 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 UBXN1Q04323 297 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 QPCTQ16769 361 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 ARMC6Q6NXE6 501 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 D2HGDHQ8N465 521 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 TRAM1L1Q8N609 369 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 ENOX1Q8TC92 643 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 NLNQ9BYT8 704 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 SOHLH2Q9NX45 425 aa17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 COPG1Q9Y678 874 aaKnown RBP17.44■□□□□ 0.38
TSPAN3-204ENST00000558394 MEN1O00255 615 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 KLHL41O60662 606 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 MTX2O75431 263 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 FTLP02792 175 aaPredicted RBP17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 RARAP10276 462 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 DCDC1P59894 354 aa17.43■□□□□ 0.38
TSPAN3-204ENST00000558394 IHHQ14623 411 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms