RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 KLHL31Q9H511 634 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 RETREG1Q9H6L5 497 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 UBTD1Q9HAC8 227 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZBTB20Q9HC78 741 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 POLD4Q9HCU8 107 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM118AQ9NWS6 357 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 SMARCAL1Q9NZC9 954 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CACNG4Q9UBN1 327 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 HSPB7Q9UBY9 170 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CPSF3Q9UKF6 684 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 UTS2RQ9UKP6 389 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 NHSL1Q5SYE7 1610 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 DIP2CQ9Y2E4 1556 aa1.34□□□□□ -2.19
CTDSPL2-202ENST00000558373 CBY3A6NI87 242 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TISP43B9A030 160 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM150CB9EJG8 249 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHEK1O14757 476 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PLSCR1O15162 318 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 KCNN4O15554 427 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 NOL3O60936 208 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ATP2C2O75185 946 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ENTPD3O75355 529 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 IDH1O75874 414 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 VNN1O95497 513 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 H1F0P07305 194 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 EPORP19235 508 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRIM21P19474 475 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 FRKP42685 505 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 HOXA1P49639 335 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CLCNKAP51800 687 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 F2RL1P55085 397 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TPD52P55327 224 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 KBTBD12Q3ZCT8 623 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PACS1Q6VY07 963 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PQLC2Q6ZP29 291 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MCM10Q7L590 875 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CAMKMTQ7Z624 323 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZSCAN30Q86W11 494 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CLYBLQ8N0X4 340 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SIX6OS1Q8N1H7 587 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 BOLLQ8N9W6 283 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLC38A9Q8NBW4 561 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CAMKVQ8NCB2 501 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 KIAA1524Q8TCG1 905 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM174Q8WUU8 243 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CDCA5Q96FF9 252 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PGM2Q96G03 612 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 RITA1Q96K30 269 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SGK494Q96LW2 274 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 AK8Q96MA6 479 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 NLRP4Q96MN2 994 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 NAP1L3Q99457 506 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM213AQ9BRX8 229 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 HERC2P3Q9BVR0 1158 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 C1QTNF7Q9BXJ2 289 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 IL21RQ9HBE5 538 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 WDR6Q9NNW5 1121 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GSN-AS1Q9NRJ2 163 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR6C3Q9NZP0 311 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 HACL1Q9UJ83 578 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 FBXL5Q9UKA1 691 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 AGO1Q9UL18 857 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PCDHGB4Q9UN71 923 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRPV2Q9Y5S1 764 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 KIAA1671Q9BY89 1806 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ASTN2O75129 1339 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ALS2Q96Q42 1657 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A0U1RQF3 1178 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GTPBP10A4D1E9 387 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MYMKA6NI61 221 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR6C75A6NL08 312 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 DDX39AO00148 427 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 O00370 1275 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ADAM20O43506 726 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZBTB14O43829 449 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ERAL1O75616 437 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR2C1O95371 312 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGLV2-14P01704 120 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GSTA2P09210 222 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CDK4P11802 303 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PCSK6P29122 969 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 OAS2P29728 719 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GLIPR1P48060 266 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MMP15P51511 669 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SSTP61278 116 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 SIM1P81133 766 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GAB1Q13480 694 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 CUL3Q13618 768 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MED22Q15528 200 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 TDRD12Q587J7 1177 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF628Q5EBL2 1059 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 WASHC2DQ5SRD0 308 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 GKAP1Q5VSY0 366 aaPredicted RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 MORN5Q5VZ52 161 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 ETFRF1Q6IPR1 90 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 PAPD4Q6PIY7 484 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 LCTLQ6UWM7 567 aa1.34□□□□□ -2.2
CTDSPL2-202ENST00000558373 LDB1Q86U70 411 aaPredicted RBP1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms