RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NCF1CA8MVU1 366 aaPredicted RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 IPO13O94829 963 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 PCDH8O95206 1070 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 HSPA4LO95757 839 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 MTHFD2P13995 350 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 NCF1P14598 390 aaPredicted RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 ACSBG2Q5FVE4 666 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 TMPRSS6Q8IU80 811 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 ZBTB2Q8N680 514 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 DDHD1Q8NEL9 900 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 RAB7BQ96AH8 199 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 ABCF3Q9NUQ8 709 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 RNF112Q9ULX5 631 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 CKAP5Q14008 2032 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 PRR23AA6NEV1 266 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 IGLON5A6NGN9 336 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 TGDSO95455 350 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 MSH3P20585 1137 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 PRKAA2P54646 552 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 ATP6V0D1P61421 351 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 SLC44A4Q53GD3 710 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 ARL13AQ5H913 290 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 SEL1L3Q68CR1 1132 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 RAET1GQ6H3X3 334 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 CYP2U1Q7Z449 544 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 ZNF781Q8N8C0 355 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 PPP4R1Q8TF05 950 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 FAM3CQ92520 227 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 FUBP1Q96AE4 644 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 SPATS2LQ9NUQ6 558 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 FBXL12Q9NXK8 326 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 FAM8A1Q9UBU6 413 aa20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 NDRG2Q9UN36 371 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-205ENST00000558036 SUPT3HB4E1H0 165 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 SGTAO43765 313 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 SUPT3HO75486 399 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 OR56A5P0C7T3 313 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 CCR7P32248 378 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 PFKFB4Q16877 469 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 RHEBL1Q8TAI7 183 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 STAG3L4Q8TBR4 150 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 DTX3LQ8TDB6 740 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 TMEM120AQ9BXJ8 343 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 UTP6Q9NYH9 597 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 CNOT6Q9ULM6 557 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 LRRC14BA6NHZ5 514 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 KERAO60938 352 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 H2AFYO75367 372 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 SIX3O95343 332 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 TDGQ13569 410 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 E2F5Q15329 346 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 LSMEM2Q8N112 164 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 PTGR2Q8N8N7 351 aaPredicted RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 PLA2G15Q8NCC3 412 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 PIWIL2Q8TC59 973 aaKnown RBP20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 VPS35Q96QK1 796 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 DRC3Q9H069 523 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 CD248Q9HCU0 757 aa20.12■□□□□ 0.81
SNRPA1-205ENST00000558036 TMEM114B3SHH9 223 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 SMIM24O75264 130 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 MPSTP25325 297 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 GPR1P46091 355 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CTSCP53634 463 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 AQP5P55064 265 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 DNAJB13P59910 316 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CCINQ13939 588 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 RCN2Q14257 317 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 LEXMQ3ZCV2 418 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 HSF5Q4G112 596 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CFAP157Q5JU67 520 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 RASGEF1AQ8N9B8 481 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CFAP99D6REC4 459 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 ANKRD65E5RJM6 399 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 F8W8V4 182 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 DNTTP04053 509 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 TPBGLP0DKB5 382 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 SRFP11831 508 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 GFAPP14136 432 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 TSPAN8P19075 237 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 HK3P52790 923 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CREB5Q02930 508 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 HSPA14Q0VDF9 509 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 BOP1Q14137 746 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 FAM219BQ5XKK7 198 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 TMEM92Q6UXU6 159 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 KCNV2Q8TDN2 545 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 KLK6Q92876 244 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 PANX3Q96QZ0 392 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 OSBPL6Q9BZF3 934 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 CD93Q9NPY3 652 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 PRDM6Q9NQX0 595 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 LRRK1Q38SD2 2015 aa20.11■□□□□ 0.81
SNRPA1-205ENST00000558036 TMEM115Q12893 351 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 LDLRAP1Q5SW96 308 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 PHYKPLQ8IUZ5 450 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 OR14C36Q8NHC7 312 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 CCDC126Q96EE4 140 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 ADAMTS6Q9UKP5 1117 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 USH1CQ9Y6N9 552 aa20.1■□□□□ 0.81
SNRPA1-205ENST00000558036 TMEM202A6NGA9 273 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms