RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 FBN2P35556 2912 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 ANKRD66B4E2M5 251 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 JCHAINP01591 159 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 EBLN1P0CF75 366 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 IL4RP24394 825 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 RPL10P27635 214 aaKnown RBP17.98■□□□□ 0.47
ABCD4-228ENST00000557588 C1QL3Q5VWW1 255 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 CXorf40BQ96DE9 158 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 MLPHQ9BV36 600 aaPredicted RBP17.98■□□□□ 0.47
ABCD4-228ENST00000557588 NUP85Q9BW27 656 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 NUDT9Q9BW91 350 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 RBM22Q9NW64 420 aaKnown RBP eCLIP17.98■□□□□ 0.474e-6■■□□□ 13.3
ABCD4-228ENST00000557588 SLC5A6Q9Y289 635 aa17.98■□□□□ 0.47
ABCD4-228ENST00000557588 VEGFDO43915 354 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 TMEM63AO94886 807 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 FTLP02792 175 aaPredicted RBP17.97■□□□□ 0.47
ABCD4-228ENST00000557588 HLA-DQB2P05538 268 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 GZMAP12544 262 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 SLC25A11Q02978 314 aaKnown RBP17.97■□□□□ 0.47
ABCD4-228ENST00000557588 GPS2Q13227 327 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 NR6A1Q15406 480 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 ALS2CLQ60I27 953 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 TRAM1L1Q8N609 369 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 GPR26Q8NDV2 337 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 ANKRD20A12PQ8NF67 263 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 C5orf34Q96MH7 638 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 LRFN5Q96NI6 719 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 TSGA13Q96PP4 275 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 CD180Q99467 661 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 MFRPQ9BY79 579 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 MRPL47Q9HD33 250 aaKnown RBP17.97■□□□□ 0.47
ABCD4-228ENST00000557588 MAP10Q9P2G4 905 aa17.97■□□□□ 0.47
ABCD4-228ENST00000557588 TLCD2A6NGC4 264 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 SCRG1O75711 98 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 CBX6O95503 412 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 MMP2P08253 660 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 MYBL1P10243 752 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 IDSP22304 550 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 FECHP22830 423 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 CCNCP24863 283 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 DRG2P55039 364 aaKnown RBP17.96■□□□□ 0.47
ABCD4-228ENST00000557588 TUBB4BP68371 445 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 TUBB2AQ13885 445 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
ABCD4-228ENST00000557588 IFI16Q16666 785 aaKnown RBP17.96■□□□□ 0.47
ABCD4-228ENST00000557588 ZRANB3Q5FWF4 1079 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 NCBP2-AS2Q69YL0 99 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 KLHL35Q6PF15 583 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 CERS6Q6ZMG9 384 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 C11orf96Q7Z7L8 435 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 D2HGDHQ8N465 521 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 GLIS1Q8NBF1 620 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 GPR150Q8NGU9 434 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 OR8K5Q8NH50 307 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 FAM71BQ8TC56 605 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 MR1Q95460 341 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 TRIM11Q96F44 468 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 SMAD5Q99717 465 aaKnown RBP17.96■□□□□ 0.47
ABCD4-228ENST00000557588 TUBB2BQ9BVA1 445 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 ADGRE3Q9BY15 652 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 CHST8Q9H2A9 424 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 ZFYVE1Q9HBF4 777 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 LATS2Q9NRM7 1088 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 RAD18Q9NS91 495 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 GPR83Q9NYM4 423 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 WDR37Q9Y2I8 494 aa17.96■□□□□ 0.47
ABCD4-228ENST00000557588 KRT86O43790 486 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 RAB40ALP0C0E4 278 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 ELAVL4P26378 380 aaKnown RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 HSD11B2P80365 405 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 KRT81Q14533 505 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 KHDC1Q4VXA5 237 aaKnown RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 APTXQ7Z2E3 356 aaKnown RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 TMEM126BQ8IUX1 230 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 IQCKQ8N0W5 287 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 NIPA2Q8N8Q9 360 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 TMEM102Q8N9M5 508 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 ZNF501Q96CX3 271 aaPredicted RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 SNRNP40Q96DI7 357 aaKnown RBP17.95■□□□□ 0.46
ABCD4-228ENST00000557588 C19orf60Q96EN9 201 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 MAP3K3Q99759 626 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 SNX7Q9UNH6 387 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 PCSK5Q92824 1860 aa17.95■□□□□ 0.46
ABCD4-228ENST00000557588 C2CD3Q4AC94 2353 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 LRRC10BA6NIK2 292 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 MTX2O75431 263 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 CD48P09326 243 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 VCLP18206 1134 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 CD86P42081 329 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 HALP42357 657 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 ARL4DP49703 201 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 VAV2P52735 878 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 GSDMDP57764 484 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 MMRN1Q13201 1228 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 GALNT3Q14435 633 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 PIGHQ14442 188 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-228ENST00000557588 DNTTIP2Q5QJE6 756 aaKnown RBP17.94■□□□□ 0.46
ABCD4-228ENST00000557588 MED25Q71SY5 747 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 ZNF571Q7Z3V5 609 aaPredicted RBP17.94■□□□□ 0.46
ABCD4-228ENST00000557588 ENDOVQ8N8Q3 282 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms