RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ARFGAP3Q9NP61 516 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KLC4Q9NSK0 619 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 NLE1Q9NVX2 485 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 SAMD15Q9P1V8 674 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 LRIT1Q9P2V4 623 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KLK13Q9UKR3 277 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 CNOT6Q9ULM6 557 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PNMA8BQ9ULN7 279 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PYCARDQ9ULZ3 195 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KCNK6Q9Y257 313 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OAS3Q9Y6K5 1087 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 COL5A1P20908 1838 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 A0A0G2JNG1 304 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM8BA6NDV4 472 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 USP27XA6NNY8 438 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 QSOX1O00391 747 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 NDC80O14777 642 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 DKK1O94907 266 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 VIPP01282 170 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 RPLP0P05388 317 aaKnown RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PNLIPP16233 465 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PAMP19021 973 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 SCTRP47872 440 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CLCNKAP51800 687 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF140P52738 457 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TERF1P54274 439 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 SESN2P58004 480 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CACNG1Q06432 222 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 KIR2DS5Q14953 304 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TRIP13Q15645 432 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PLA2G4EQ3MJ16 856 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 MAP9Q49MG5 647 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 FASTKD1Q53R41 847 aaKnown RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PCID2Q5JVF3 399 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF648Q5T619 568 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 GPRC6AQ5T6X5 926 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CASC4Q6P4E1 433 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM220Q6QAJ8 160 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 AFTPHQ6ULP2 937 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 UNQ6494/PRO21346Q6UXR6 183 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PCGF5Q86SE9 256 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 AMZ2Q86W34 360 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 OTUD6BQ8N6M0 293 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 BEND7Q8N7W2 519 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 OR6P1Q8NGX9 317 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 GABPB2Q8TAK5 448 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 COG1Q8WTW3 980 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 NXPE2Q96DL1 559 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 DNAJC1Q96KC8 554 aaKnown RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 CAPZA3Q96KX2 299 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM74Q96NL1 305 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 STRADBQ9C0K7 418 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 IL22Q9GZX6 179 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 SPATS2LQ9NUQ6 558 aaKnown RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 SMOXQ9NWM0 555 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 PIH1D1Q9NWS0 290 aaKnown RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 ASIC3Q9UHC3 531 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 DNAJC16Q9Y2G8 782 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 KCTD3Q9Y597 815 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 DNMT3AQ9Y6K1 912 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-223ENST00000557511 AK5Q9Y6K8 562 aa8.21□□□□□ -1.1
PSEN1-223ENST00000557511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TRBV23OR9-2A0A075B6M9 112 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC78A2IDD5 438 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 FAM149AA5PLN7 773 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 FAM221BA6H8Z2 402 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 OR2AG2A6NM03 316 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 H7C0S8 307 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC188H7C350 402 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 CHUKO15111 745 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF185O15231 689 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 LDB2O43679 373 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 NOBOXO60393 691 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 POP7O75817 140 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 WFS1O76024 890 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 FUCA1P04066 466 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 F3P13726 295 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TPSB2P20231 275 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 ALDH4A1P30038 563 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 PBLDP30039 288 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 GPR3P46089 330 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 MAZP56270 477 aaKnown RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 INSM1Q01101 510 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 HHEXQ03014 270 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 TARDBPQ13148 414 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSEN1-223ENST00000557511 KRT33BQ14525 404 aa8.2□□□□□ -1.1
PSEN1-223ENST00000557511 HLTFQ14527 1009 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms