RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 TBC1D3FA6NER0 549 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TCP11X1B4DZS4 312 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TARM1B6A8C7 271 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TBC1D3LB9A6J9 549 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 G3V2L1 256 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 SGTAO43765 313 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 MAGEC1O60732 1142 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 RBP1P09455 135 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 SBK3P0C264 359 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TBC1D3HP0C7X1 549 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 NEFHP12036 1026 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 CPA3P15088 417 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TFEBP19484 476 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 IL2P60568 153 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ATP6V0D1P61421 351 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 PPP2CBP62714 309 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 PPP2CAP67775 309 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 SGCGQ13326 291 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TBC1D3GQ6DHY5 549 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TBC1D3CQ6IPX1 549 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ZYG11AQ6WRX3 759 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TRIM69Q86WT6 500 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 NUDCD3Q8IVD9 361 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TBC1D3Q8IZP1 549 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 GJD3Q8N144 294 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TMEM151AQ8N4L1 468 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ZBTB2Q8N680 514 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 RASGEF1AQ8N9B8 481 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 PLA2G15Q8NCC3 412 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 OR2T34Q8NGX1 318 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 LRRC8CQ8TDW0 803 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ASB12Q8WXK4 309 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 KLK6Q92876 244 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 CLDN23Q96B33 292 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 LINGO1Q96FE5 620 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 ZNF317Q96PQ6 595 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 HHIPQ96QV1 700 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 TRPM6Q9BX84 2022 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 SLC17A9Q9BYT1 436 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 BTBD1Q9H0C5 482 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 EPN3Q9H201 632 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 CHRDQ9H2X0 955 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 SPATS2LQ9NUQ6 558 aaKnown RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 CPSF2Q9P2I0 782 aaKnown RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 EBF1Q9UH73 591 aa14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 MBD1Q9UIS9 605 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-208ENST00000557498 LRRC72A6NJI9 287 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ZBTB14O43829 449 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TSPAN12O95859 305 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 FTH1P02794 183 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 MYL2P10916 166 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 BGNP21810 368 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ACSL1P33121 698 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 SEC24CP53992 1094 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TMEM115Q12893 351 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 GTF2H3Q13889 308 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TERF2Q15554 542 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 CHI3L2Q15782 390 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TTLL9Q3SXZ7 439 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ANO7Q6IWH7 933 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ISCA2Q86U28 154 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TRIM74Q86UV6 250 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 HEATR4Q86WZ0 1026 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 RAB3IL1Q8TBN0 382 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 ZNF75CPQ92670 426 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 PTERQ96BW5 349 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 SGF29Q96ES7 293 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 COX14Q96I36 57 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 LENG8Q96PV6 779 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TFB2MQ9H5Q4 396 aaKnown RBP14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 MANSC1Q9H8J5 431 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 TRIM39Q9HCM9 518 aa14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 MBNL1Q9NR56 388 aaKnown RBP14.27□□□□□ -0.13
ARHGEF40-208ENST00000557498 CCDC189A1A4V9 331 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 NPEPPSL1A6NEC2 478 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 OR2AG2A6NM03 316 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 KLF11O14901 512 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 VEGFDO43915 354 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 SEMA4FO95754 770 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 PAK4O96013 591 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 VIMP08670 466 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 CBSLP0DN79 551 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 FGF3P11487 239 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 KCNA4P22459 653 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 AOAHP28039 575 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 MAT2AP31153 395 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 CCR7P32248 378 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 CBSP35520 551 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 IGFALSP35858 605 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 PRLHRP49683 370 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 RGS4P49798 205 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 CTSCP53634 463 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 CDK3Q00526 305 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 BCL7AQ4VC05 210 aa14.26□□□□□ -0.13
ARHGEF40-208ENST00000557498 ACSBG2Q5FVE4 666 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms