RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 AP1S2P56377 157 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 GSTM4Q03013 218 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 TBX2Q13207 712 aaPredicted RBP8.29□□□□□ -1.08
CHD8-213ENST00000557364 UGCGQ16739 394 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 SDHAF4Q5VUM1 108 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 FAM91A1Q658Y4 838 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 UNQ6126/PRO20091Q6UXV3 157 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 GDPD4Q6W3E5 623 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 XYLT1Q86Y38 959 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 CPNE9Q8IYJ1 553 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 SH3RF2Q8TEC5 729 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 LGMNQ99538 433 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 TTYH1Q9H313 450 aaPredicted RBP8.29□□□□□ -1.08
CHD8-213ENST00000557364 NKIRAS2Q9NYR9 191 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 PHF11Q9UIL8 331 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 FBXW11Q9UKB1 542 aa8.29□□□□□ -1.08
CHD8-213ENST00000557364 ZNF490Q9ULM2 529 aaPredicted RBP8.29□□□□□ -1.08
CHD8-213ENST00000557364 A0A1W2PQ72 361 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TRIM38O00635 465 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 GABRDO14764 452 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 HNF4AP41235 474 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ACTR1BP42025 376 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 IDH2P48735 452 aaKnown RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 ACTR1AP61163 376 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 MAXP61244 160 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SLC13A2Q13183 592 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ARL14EPQ8N8R7 260 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 FAM13CQ8NE31 585 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ING5Q8WYH8 240 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SLC4A9Q96Q91 983 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 MCMBPQ9BTE3 642 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 WRAP53Q9BUR4 548 aaKnown RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 SAMHD1Q9Y3Z3 626 aaKnown RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 TRIM43BA6NCK2 446 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ADAMDEC1O15204 470 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 VBP1P61758 197 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 AUHQ13825 339 aaKnown RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 ITPRIPL2Q3MIP1 535 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 P4HA3Q7Z4N8 544 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 MYOCQ99972 504 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SLC32A1Q9H598 525 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 DLGAP2Q9P1A6 1054 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PTGFRNQ9P2B2 879 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 NFAT5O94916 1531 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FSCN2O14926 492 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ALOX15BO15296 676 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SERPINA3P01011 423 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 CHRNGP07510 517 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SAGP10523 405 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 GRK6P43250 576 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 CASP5P51878 434 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SEC24CP53992 1094 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SEC13P55735 322 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SF3B4Q15427 424 aaKnown RBP eCLIP8.28□□□□□ -1.089e-8■■■□□ 16.6
CHD8-213ENST00000557364 MAPK11Q15759 364 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ABRAXAS1Q6UWZ7 409 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 RTL10Q7L3V2 364 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 KCNK18Q7Z418 384 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TSPAN14Q8NG11 270 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 NR4A3Q92570 626 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ART4Q93070 314 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 LRMDAQ9H2I8 198 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PGRMC2O15173 223 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SLC31A1O15431 190 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FGFR3P22607 806 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 HRH2P25021 359 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 DAOAP59103 153 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 BROXQ5VW32 411 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FBXO46Q6PJ61 603 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 KLHL32Q96NJ5 620 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 L1RE1Q9UN81 338 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 CLCA3PQ9Y6N3 262 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 UGT2B11O75310 529 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 GJA9P57773 515 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ZNF311Q5JNZ3 666 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PIGXQ8TBF5 258 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ACOT12Q8WYK0 555 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SLC38A4Q969I6 547 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ZDHHC12Q96GR4 267 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 FZD8Q9H461 694 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 DNAJC28Q9NX36 388 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ZNF282Q9UDV7 671 aaPredicted RBP8.28□□□□□ -1.08
CHD8-213ENST00000557364 GLS2Q9UI32 602 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 SSR3Q9UNL2 185 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TCAF1Q9Y4C2 921 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TMX2-CTNND1H3BSU7 103 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 MT-CO1P00395 513 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 TCF4P15884 667 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 ZNF844Q08AG5 666 aa8.28□□□□□ -1.08
CHD8-213ENST00000557364 PDK4Q16654 411 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms