RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LLGL1Q15334 1064 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 KAZNQ674X7 775 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 SPOCD1Q6ZMY3 1216 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 C11orf96Q7Z7L8 435 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 RCOR2Q8IZ40 523 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 UNC5BQ8IZJ1 945 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 TTC30BQ8N4P2 665 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 ESX1Q8N693 406 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 TGM7Q96PF1 710 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 VAT1Q99536 393 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 SIDT1Q9NXL6 827 aaKnown RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 HACD3Q9P035 362 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 TUBD1Q9UJT1 453 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 AKR1B15C9JRZ8 316 aaPredicted RBP15.61■□□□□ 0.09
TUBB3-213ENST00000557262 MAGEA1P43355 309 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 DRG2P55039 364 aaKnown RBP15.61■□□□□ 0.09
TUBB3-213ENST00000557262 MC1RQ01726 317 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 ADCY2Q08462 1091 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 KCNAB2Q13303 367 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 IL11RAQ14626 422 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 TFDP3Q5H9I0 405 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 SIRPB2Q5JXA9 342 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 ZC3H18Q86VM9 953 aaKnown RBP15.61■□□□□ 0.09
TUBB3-213ENST00000557262 TRAPPC5Q8IUR0 188 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 ZNF567Q8N184 647 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 SLC25A41Q8N5S1 370 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 CXorf40BQ96DE9 158 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 ZDHHC12Q96GR4 267 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 MRGPRX2Q96LB1 330 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 TRIM4Q9C037 500 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 TSPY26PQ9H489 355 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 IL17CQ9P0M4 197 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 KLHL8Q9P2G9 620 aaPredicted RBP15.61■□□□□ 0.09
TUBB3-213ENST00000557262 TRIM10Q9UDY6 481 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 EPHA6Q9UF33 1036 aa15.61■□□□□ 0.09
TUBB3-213ENST00000557262 DNMT3AQ9Y6K1 912 aaPredicted RBP15.61■□□□□ 0.09
TUBB3-213ENST00000557262 OR52A4PA6NMU1 304 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A9O60656 530 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 POP7O75817 140 aaKnown RBP15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A6P19224 532 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A1P22309 533 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A4P22310 534 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 SPAM1P38567 509 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 HALP42357 657 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 CHRNA4P43681 627 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 LEPRP48357 1165 aaKnown RBP15.6■□□□□ 0.09
TUBB3-213ENST00000557262 SEPHS1P49903 392 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 TBX2Q13207 712 aaPredicted RBP15.6■□□□□ 0.09
TUBB3-213ENST00000557262 MPP3Q13368 585 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 GPR18Q14330 331 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 NOMO1Q15155 1222 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 SLC1A5Q15758 541 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 CHRNA6Q15825 494 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 CRTC2Q53ET0 693 aaPredicted RBP15.6■□□□□ 0.09
TUBB3-213ENST00000557262 LDLRAP1Q5SW96 308 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 CACHD1Q5VU97 1274 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 AMZ2Q86W34 360 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 KATNAL2Q8IYT4 538 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 KLHL6Q8WZ60 621 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 ULBP3Q9BZM4 244 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 RAB33BQ9H082 229 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 ZNF768Q9H5H4 540 aaKnown RBP15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A7Q9HAW7 530 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A10Q9HAW8 530 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 UGT1A8Q9HAW9 530 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 TRHDEQ9UKU6 1024 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 WDR37Q9Y2I8 494 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 RPS6KL1Q9Y6S9 549 aa15.6■□□□□ 0.09
TUBB3-213ENST00000557262 hCG_1818297A0A087WSY0 165 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 HACD1B0YJ81 288 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 RASSF9O75901 435 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 PRKAR1AP10644 381 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 HLA-DPA1P20036 260 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 TCN2P20062 427 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 STAT5AP42229 794 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 SH3BP2P78314 561 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 DMPKQ09013 629 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 CDC20Q12834 499 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 PPP2R5EQ16537 467 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 TMEM220Q6QAJ8 160 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 C6orf15Q6UXA7 325 aaPredicted RBP15.59■□□□□ 0.09
TUBB3-213ENST00000557262 PRSS42Q7Z5A4 293 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 RASGEF1AQ8N9B8 481 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 BLOC1S5Q8TDH9 187 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 RSC1A1Q92681 617 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 OXNAD1Q96HP4 312 aaPredicted RBP15.59■□□□□ 0.09
TUBB3-213ENST00000557262 OR6C1Q96RD1 312 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 ZCCHC2Q9C0B9 1178 aaKnown RBP15.59■□□□□ 0.09
TUBB3-213ENST00000557262 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.59■□□□□ 0.09
TUBB3-213ENST00000557262 PKP3Q9Y446 797 aa15.59■□□□□ 0.09
TUBB3-213ENST00000557262 GLYATL1P3A0A0U1RQE8 302 aa15.58■□□□□ 0.08
TUBB3-213ENST00000557262 F5H423 210 aaPredicted RBP15.58■□□□□ 0.08
TUBB3-213ENST00000557262 KIF1CO43896 1103 aaKnown RBP15.58■□□□□ 0.08
TUBB3-213ENST00000557262 ZNF28P17035 718 aa15.58■□□□□ 0.08
TUBB3-213ENST00000557262 OAS2P29728 719 aaKnown RBP15.58■□□□□ 0.08
TUBB3-213ENST00000557262 CAPZBP47756 277 aa15.58■□□□□ 0.08
TUBB3-213ENST00000557262 ITGA9Q13797 1035 aa15.58■□□□□ 0.08
TUBB3-213ENST00000557262 DEFB109BQ30KR1 87 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms