RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CFAP99D6REC4 459 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CHUKO15111 745 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 FAM155BO75949 473 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 IVLP07476 585 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 RALBP11234 206 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF7P17097 686 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 FMO4P31512 558 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 PPARGP37231 505 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 NSG1P42857 185 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 GNPDA1P46926 289 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 GRIK2Q13002 908 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 MAP9Q49MG5 647 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF549Q6P9A3 640 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 TMEM220Q6QAJ8 160 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CRTC3Q6UUV7 619 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 RD3Q7Z3Z2 195 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 SLC26A11Q86WA9 606 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 HID1Q8IV36 788 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF547Q8IVP9 402 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 BEND7Q8N7W2 519 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 GABPB2Q8TAK5 448 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 SCG3Q8WXD2 468 aaKnown RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CDKL2Q92772 493 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 MRRFQ96E11 262 aaKnown RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 BIRC8Q96P09 236 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CYTH2Q99418 400 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CARS2Q9HA77 564 aaKnown RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 TM7SF3Q9NS93 570 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 DNAJC28Q9NX36 388 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 GON4LQ3T8J9 2241 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-211ENST00000556536 PFDN6O15212 129 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 GRID2O43424 1007 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 CSF2P04141 144 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 SHBGP04278 402 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
TUBB3-211ENST00000556536 IRX4P78413 519 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 PPARDQ03181 441 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 PYCR3Q53H96 274 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 GALNT7Q86SF2 657 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 TRAPPC5Q8IUR0 188 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 MREGQ8N565 214 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 MCMBPQ9BTE3 642 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 CLPBQ9H078 707 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 RMI1Q9H9A7 625 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 ZNHIT2Q9UHR6 403 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 GMEB2Q9UKD1 530 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 PLEKHM1Q9Y4G2 1056 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 DGKBQ9Y6T7 804 aa17.16■□□□□ 0.34
TUBB3-211ENST00000556536 IQCF5A8MTL0 148 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 GPR89AB7ZAQ6 455 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 ERLIN1O75477 346 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 AP2A2O94973 939 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 TNFP01375 233 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 GPR89BP0CG08 455 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 NME1P15531 152 aaKnown RBP17.15■□□□□ 0.34
TUBB3-211ENST00000556536 RPS3P23396 243 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■■□□ 18.7
TUBB3-211ENST00000556536 CD151P48509 253 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 HK3P52790 923 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 NAB1Q13506 487 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 TCEA2Q15560 299 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 PLA2G4EQ3MJ16 856 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 BCL7AQ4VC05 210 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 BEND6Q5SZJ8 279 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-211ENST00000556536 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 LRRTM4Q86VH4 590 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 LRRC6Q86X45 466 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 GALNT13Q8IUC8 556 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 PHACTR4Q8IZ21 702 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 LKAAEAR1Q8TD35 194 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 ATXN7L3BQ96GX2 97 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 ERVMER34-1Q9H9K5 563 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 SLC23A2Q9UGH3 650 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 VPS9D1Q9Y2B5 631 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 GPSM3Q9Y4H4 160 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 ACACBO00763 2458 aa17.15■□□□□ 0.34
TUBB3-211ENST00000556536 PLXNB3Q9ULL4 1909 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ARHGAP33O14559 1287 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 KHNYNO15037 678 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 POP7O75817 140 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 RASGRP1O95267 797 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 UQCRHP07919 91 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 PKMP14618 531 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 JUNDP17535 347 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ITGB6P18564 788 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 PRLHRP49683 370 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ADARP55265 1226 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 SF3A2Q15428 464 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 SHBQ15464 509 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF423Q2M1K9 1284 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 HLA-BQ31612 363 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 RBM20Q5T481 1227 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 PTRHD1Q6GMV3 140 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ZC3HC1Q86WB0 502 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms