RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 DGKAP23743 735 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 VARSP26640 1264 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 GJC1P36383 396 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CD86P42081 329 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CD97P48960 835 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PSMD7P51665 324 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 HPCAP84074 193 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 OTUD4Q01804 1114 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 BNIP3Q12983 259 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 NFATC4Q14934 902 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 LRRC14Q15048 493 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SMAD1Q15797 465 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ALG11Q2TAA5 492 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TNFAIP8L3Q5GJ75 292 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 FAM182AQ5T1J6 154 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CDCP2Q5VXM1 449 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 KLC3Q6P597 504 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 OGFOD3Q6PK18 319 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 THSD4Q6ZMP0 1018 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF438Q7Z4V0 828 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CROCCP2Q86T23 111 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PARGQ86W56 976 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SDR16C5Q8N3Y7 309 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF548Q8NEK5 533 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 DEFB124Q8NES8 71 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ANKK1Q8NFD2 765 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ACTL9Q8TC94 416 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ACTRT1Q8TDG2 376 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CXorf40AQ8TE69 158 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 NAT14Q8WUY8 206 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 NRG4Q8WWG1 115 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 HTR3CQ8WXA8 447 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 KLK6Q92876 244 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 KLHDC7BQ96G42 594 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SMC6Q96SB8 1091 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ARPC5LQ9BPX5 153 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 WRAP53Q9BUR4 548 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 APOOQ9BUR5 198 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 LRRC61Q9BV99 259 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 LGR4Q9BXB1 951 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D10AQ9BXI6 508 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 FRMD8P1Q9BZ68 369 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TWSG1Q9GZX9 223 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 MIR1-1HGQ9H1L0 117 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ABCG8Q9H221 673 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PCDH9Q9HC56 1237 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 INIPQ9NRY2 104 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 NLGN3Q9NZ94 848 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PLA2G2EQ9NZK7 142 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 IL1RAPL1Q9NZN1 696 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 KLHL14Q9P2G3 628 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ITGB1BP2Q9UKP3 347 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TRHDEQ9UKU6 1024 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 AMFRQ9UKV5 643 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 DNPEPQ9ULA0 475 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PACSIN2Q9UNF0 486 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TMA7Q9Y2S6 64 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PCDHGA1Q9Y5H4 931 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 HEY1Q9Y5J3 304 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SPO11Q9Y5K1 396 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PCYT1BQ9Y5K3 369 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ASCC3Q8N3C0 2202 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 A0A0U1RQS6 177 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TLDC2A0PJX2 215 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TMEM247A6NEH6 219 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 FAM47DPA6NHR8 397 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 FADS2P1A8MWK0 482 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CCDC188H7C350 402 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 FPGTO14772 594 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SCAMP1O15126 338 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SLC31A1O15431 190 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 TNFSF14O43557 240 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 LIASO43766 372 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PCDH8O95206 1070 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 MT-CYBP00156 380 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CEACAM5P06731 702 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ALPIP09923 528 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PABPC4LP0CB38 370 aaKnown RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CYP2A6P11509 494 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 MYCLP1P12525 358 aaPredicted RBP3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CKMT1AP12532 417 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ETS2P15036 469 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 RBL1P28749 1068 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CA5AP35218 305 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ETV3P41162 512 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 GRK6P43250 576 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SPINT3P49223 89 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 GDF10P55107 478 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CBLBQ13191 982 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 INPP5AQ14642 412 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 STAT4Q14765 748 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 CYP1B1Q16678 543 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ARMC12Q5T9G4 340 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 LRRC66Q68CR7 880 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 PSAPL1Q6NUJ1 521 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 ERAP2Q6P179 960 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SPATA24Q86W54 205 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SCUBE1Q8IWY4 988 aa3.88□□□□□ -1.79
LINC00648-202ENST00000555985 SPATA22Q8NHS9 363 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms