RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 ELOVL2Q9NXB9 296 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 VPS9D1Q9Y2B5 631 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 PTGDR2Q9Y5Y4 395 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 NPHS1O60500 1241 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ZNF7P17097 686 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 SERPINB5P36952 375 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ETV3P41162 512 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ERFP50548 548 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 RAP1GDS1P52306 607 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 HERVK_113P63132 956 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 SH3BP2P78314 561 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 DMC1Q14565 340 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ZNF648Q5T619 568 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 TMEM154Q6P9G4 183 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ETFBKMTQ8IXQ9 262 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 TRPC4APQ8TEL6 797 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 KCNJ9Q92806 393 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ZNF641Q96N77 438 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 KCNA7Q96RP8 456 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 MCCC1Q96RQ3 725 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 RPP25Q9BUL9 199 aaKnown RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 POPDC3Q9HBV1 291 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
LINC00638-201ENST00000555578 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 PLA2G4CQ9UP65 541 aa13.8□□□□□ -0.2
LINC00638-201ENST00000555578 CCDC85CA6NKD9 419 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 KPNA3O00505 521 aaPredicted RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 ATP5BP06576 529 aaKnown RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 TCF3P15923 654 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 TIMP2P16035 220 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 EEF1DP29692 281 aaKnown RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FOXA1P55317 472 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 DLX2Q07687 328 aaPredicted RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 HYAL1Q12794 435 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 ASPHQ12797 758 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 PPP1R3AQ16821 1122 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 VITQ6UXI7 678 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 ARHGAP22Q7Z5H3 698 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 CATSPER2Q96P56 530 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FAM83CQ9BQN1 747 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 TFB2MQ9H5Q4 396 aaKnown RBP13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 IL36AQ9UHA7 158 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 TMPRSS11EQ9UL52 423 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FCARP24071 287 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 SPINT3P49223 89 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 B4GALNT1Q00973 533 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 ARHGEF7Q14155 803 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 FBXO39Q8N4B4 442 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 CCDC126Q96EE4 140 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 CLPTM1LQ96KA5 538 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 DEC1Q9P2X7 70 aa13.79□□□□□ -0.2
LINC00638-201ENST00000555578 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 F8W8V4 182 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 KERAO60938 352 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 PRDX3P30048 256 aaKnown RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 POLE2P56282 527 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 BTKQ06187 659 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 FNDC3BQ53EP0 1204 aaKnown RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 CERS6Q6ZMG9 384 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 RHEBL1Q8TAI7 183 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 SPATA16Q9BXB7 569 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 DHRS7Q9Y394 339 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 PPIL1Q9Y3C6 166 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 KIF26AQ9ULI4 1882 aaPredicted RBP13.78□□□□□ -0.2
LINC00638-201ENST00000555578 TRBV5-4A0A0C4DH59 114 aa13.78□□□□□ -0.2
LINC00638-201ENST00000555578 C16orf96A6NNT2 1141 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms