RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 B3GALT5Q9Y2C3 310 aa5.29□□□□□ -1.56
CKS1BP1-201ENST00000555221 LILRA5A6NI73 299 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 BUD23O43709 281 aaKnown RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TBX10O75333 385 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 PSMD10O75832 226 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 GGPS1O95749 300 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 ACAA1P09110 424 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 LINC00271P0C7V0 271 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF12P17014 697 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 CORO1AP31146 461 aaKnown RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 GNL1P36915 607 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 USP8P40818 1118 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 CCR3P51677 355 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 PPP5CP53041 499 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 RAD23AP54725 363 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 SNRPEP62304 92 aaKnown RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TUBA1BP68363 451 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMEM35AQ53FP2 167 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 C1orf141Q5JVX7 400 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 ZNF704Q6ZNC4 412 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 CEP57Q86XR8 500 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TC2NQ8N9U0 490 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TBC1D16Q8TBP0 767 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 SLC44A1Q8WWI5 657 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 TMEM19Q96HH6 336 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 MOV10L1Q9BXT6 1211 aaKnown RBP5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 VDAC3Q9Y277 283 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
CKS1BP1-201ENST00000555221 CACNA1IQ9P0X4 2223 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 A0A1W2PP11 408 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 OVOL3O00110 214 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CREG1O75629 220 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 PMS2P2O95744 297 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 DAOP14920 347 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CPT2P23786 658 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 LINC00205P59089 165 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 MELKQ14680 651 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF628Q5EBL2 1059 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 SPECC1Q5M775 1068 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM211Q6ICI0 200 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CREB3L2Q70SY1 520 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CHST3Q7LGC8 479 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ATG9AQ7Z3C6 839 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CAMKMTQ7Z624 323 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ADIPOR2Q86V24 386 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 C1orf87Q8N0U7 546 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 C1orf52Q8N6N3 182 aaKnown RBP5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 KCNH5Q8NCM2 988 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLC38A5Q8WUX1 472 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ABTB1Q969K4 478 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 RMDN1Q96DB5 314 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 CFAP57Q96MR6 1250 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZMAT2Q96NC0 199 aaKnown RBP5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 SLC22A12Q96S37 553 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 OSGIN1Q9UJX0 560 aa5.27□□□□□ -1.57
CKS1BP1-201ENST00000555221 ASTN2O75129 1339 aaPredicted RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TSPY2A6NKD2 308 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 C15orf62A8K5M9 175 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 ANKRD66B4E2M5 251 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 SSX4O60224 188 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TSPY3P0CV98 308 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TSPY8P0CW00 308 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CDKN2AP42771 156 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CSE1LP55060 971 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 EEF1A1P68104 462 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 COG7P83436 770 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TSPY1Q01534 308 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 LTBQ06643 244 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 DLG1Q12959 904 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 ZNF234Q14588 700 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 NR1D2Q14995 579 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 LETM2Q2VYF4 491 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 EEF1A1P5Q5VTE0 462 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CCDC186Q7Z3E2 898 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 FBXO39Q8N4B4 442 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 RBMXL3Q8N7X1 1067 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PAPD5Q8NDF8 572 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 RBM15BQ8NDT2 890 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 SPATA22Q8NHS9 363 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CFAP61Q8NHU2 1237 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 VPS33AQ96AX1 596 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 RTP4Q96DX8 246 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 SPACA9Q96E40 222 aaPredicted RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 ARSGQ96EG1 525 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 CDCA5Q96FF9 252 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PCYT2Q99447 389 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TM6SF1Q9BZW5 370 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 IL25Q9H293 177 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PIH1D3Q9NQM4 214 aaKnown RBP5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 TMEM30AQ9NV96 361 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 HAO2Q9NYQ3 351 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 C5AR2Q9P296 337 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 WDR35Q9P2L0 1181 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PCDHAC2Q9Y5I4 1007 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 EVPLQ92817 2033 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PCSK5Q92824 1860 aa5.26□□□□□ -1.57
CKS1BP1-201ENST00000555221 PDS5AQ29RF7 1337 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms