RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TMPRSS9Q7Z410 1059 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 LDB1Q86U70 411 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 GATA6Q92908 595 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 GLMNQ92990 594 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 MFSD3Q96ES6 412 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 SERPINB12Q96P63 405 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 OSGEPL1Q9H4B0 414 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 LRIT1Q9P2V4 623 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 ATXN7L1Q9ULK2 861 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-214ENST00000554928 MSRB2Q9Y3D2 182 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 NEUROG3Q9Y4Z2 214 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 PTPRBP23467 1997 aa12.16□□□□□ -0.46
SYNE2-214ENST00000554928 ARHGEF17Q96PE2 2063 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 RP1P56715 2156 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 IGLV3-16A0A075B6K0 115 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 PMS2P1A4D2B8 440 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GPR89AB7ZAQ6 455 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 OR1I1O60431 355 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GAS8O95995 478 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 RPLP0P05388 317 aaKnown RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GPR89BP0CG08 455 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GLB1P16278 677 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 RPL10P27635 214 aaKnown RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 CLCNKAP51800 687 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 OR1D5P58170 312 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 CACNG1Q06432 222 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GTF2H3Q13889 308 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 SKIDA1Q1XH10 827 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 IYDQ6PHW0 289 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 SPRED1Q7Z699 444 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 B3GNT8Q7Z7M8 397 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 SFRP1Q8N474 314 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 CLDN19Q8N6F1 224 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 GRK7Q8WTQ7 553 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 SLCO2A1Q92959 643 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 NAT6Q93015 286 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 KRT12Q99456 494 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 COPS8Q99627 209 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 C19orf43Q9BQ61 176 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 TIMM29Q9BSF4 260 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 KIFC1Q9BW19 673 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 IL1RAPL1Q9NZN1 696 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 NCKIPSDQ9NZQ3 722 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 ZNF624Q9P2J8 865 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-214ENST00000554928 ASIC3Q9UHC3 531 aa12.15□□□□□ -0.46
SYNE2-214ENST00000554928 ASPMQ8IZT6 3477 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 OR52A4PA6NMU1 304 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 GOLGA8KD6RF30 607 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 GOLGA8TH3BQL2 631 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-214ENST00000554928 DNALI1O14645 258 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-214ENST00000554928 TP73O15350 636 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 F3P13726 295 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 JUPP14923 745 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 MAGEA3P43357 314 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 NPY2RP49146 381 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CDK16Q00536 496 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 E2F1Q01094 437 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 DR1Q01658 176 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CFHR1Q03591 330 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CLCA4Q14CN2 919 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF658BQ4V348 819 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-214ENST00000554928 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-214ENST00000554928 NKAIN2Q5VXU1 208 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 IZUMO3Q5VZ72 239 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 NAPRTQ6XQN6 538 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF438Q7Z4V0 828 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 TMPRSS12Q86WS5 348 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 DCBLD1Q8N8Z6 715 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 MCUQ8NE86 351 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 OR6P1Q8NGX9 317 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 ULK4Q96C45 1275 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 TTC25Q96NG3 672 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 IL22Q9GZX6 179 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 LRRN3Q9H3W5 708 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 BFARQ9NZS9 450 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 RIMKLBQ9ULI2 386 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 SOX13Q9UN79 622 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 CLCA2Q9UQC9 943 aa12.14□□□□□ -0.47
SYNE2-214ENST00000554928 PDZK1P1A8MUH7 402 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 AGRPO00253 132 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms