RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZNF648Q5T619 568 aaPredicted RBP16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 TMEM220Q6QAJ8 160 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 MICALCLQ6ZW33 695 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 TRAPPC5Q8IUR0 188 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 HID1Q8IV36 788 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 HNRNPLLQ8WVV9 542 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 SGF29Q96ES7 293 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 OR2M4Q96R27 311 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 CCDC77Q9BR77 488 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 TIMM29Q9BSF4 260 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 CCDC68Q9H2F9 335 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 SMYD2Q9NRG4 433 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 DNAJC28Q9NX36 388 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 ZNHIT2Q9UHR6 403 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 MOSPD1Q9UJG1 213 aa16.21■□□□□ 0.19
SPTLC2-203ENST00000554901 C17orf113A0A1B0GUU1 675 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 UBA6A0AVT1 1052 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 SGTAO43765 313 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 AHSGP02765 367 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 FTH1P02794 183 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 VCLP18206 1134 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 GP5P40197 560 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 CTSCP53634 463 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 SLC29A2Q14542 456 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 HLA-BQ31612 363 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 STRA8Q7Z7C7 330 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF547Q8IVP9 402 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 CTAGE3PQ8IX95 158 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 FSTL5Q8N475 847 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 CLDN19Q8N6F1 224 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 UBLCP1Q8WVY7 318 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 BIRC8Q96P09 236 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 PANX3Q96QZ0 392 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 EPB41L4BQ9H329 900 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 PPCSQ9HAB8 311 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 MRPL40Q9NQ50 206 aaKnown RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 FBXO6Q9NRD1 293 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 SEMA4GQ9NTN9 838 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 SPASTQ9UBP0 616 aa16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 APOBEC3BQ9UH17 382 aaKnown RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-203ENST00000554901 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 OR2AG2A6NM03 316 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CXorf49A8MYA2 514 aaPredicted RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 HAUS5O94927 633 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF883P0CG24 379 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CTSEP14091 401 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PKMP14618 531 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ENGP17813 658 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GABRB3P28472 473 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GNPDA1P46926 289 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CLCNKAP51800 687 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ATXN3P54252 364 aaPredicted RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 EIF3BP55884 814 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 MPP1Q00013 466 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 DMPKQ09013 629 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ELOCQ15369 112 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GRTP1Q5TC63 336 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PTRHD1Q6GMV3 140 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 C11orf96Q7Z7L8 435 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PPM1NQ8N819 430 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 MCMBPQ9BTE3 642 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 RHOJQ9H4E5 214 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GAREM1Q9H706 876 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 KLF15Q9UIH9 416 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CRYL1Q9Y2S2 319 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CSNK1G3Q9Y6M4 447 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PCDH15Q96QU1 1955 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 KPNA5O15131 536 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CD9P21926 228 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 HSD17B3P37058 310 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CCT8P50990 548 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 SPEM2Q0P670 501 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ILF3Q12906 894 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CCDC6Q16204 474 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ZNF789Q5FWF6 425 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 UBAP2Q5T6F2 1119 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 KCTD16Q68DU8 428 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CNSTQ6PJW8 725 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 DET1Q7L5Y6 550 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 RD3Q7Z3Z2 195 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 AMZ2Q86W34 360 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 ZC3HC1Q86WB0 502 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PNPLA1Q8N8W4 532 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GPBAR1Q8TDU6 330 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 KCNJ9Q92806 393 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CCDC97Q96F63 343 aaPredicted RBP16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 RBBP8Q99708 897 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 CCM2Q9BSQ5 444 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GSDMCQ9BYG8 508 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 KLHL42Q9P2K6 505 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 GPSM3Q9Y4H4 160 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PSAT1Q9Y617 370 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 PRSS21Q9Y6M0 314 aa16.19■□□□□ 0.18
SPTLC2-203ENST00000554901 EXOC1LA0A1B0GW35 172 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 LNP1A1A4G5 178 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 MGAT4DA6NG13 374 aa16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 POP7O75817 140 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-203ENST00000554901 PIAS2O75928 621 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms