RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 STAG3L4Q8TBR4 150 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 IRF7Q92985 503 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SLC7A6OSQ96CW6 309 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CMTM5Q96DZ9 223 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 DHRS4Q9BTZ2 278 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SPO11Q9Y5K1 396 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 GLYATL1P3A0A0U1RQE8 302 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PDLIM1O00151 329 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 AGRPO00253 132 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PRMT5O14744 637 aaPredicted RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 NUDT2P50583 147 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 NR1H2P55055 460 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 ERAP2Q6P179 960 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 CEP97Q8IW35 865 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 DEFB107AQ8IZN7 70 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 RBM15BQ8NDT2 890 aaKnown RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 ARRDC2Q8TBH0 407 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 TRMT2BQ96GJ1 504 aaKnown RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 MFSD1Q9H3U5 465 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 COPS7BQ9H9Q2 264 aaPredicted RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 HOXC13P31276 330 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 SLC18A1P54219 525 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 ANKS6Q68DC2 871 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 CHPFQ8IZ52 775 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PGBD3Q8N328 593 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 EHD1Q9H4M9 534 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 COG4Q9H9E3 785 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 NPEPPSL1A6NEC2 478 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 TRPC5OSA6NMA1 111 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PLIN5Q00G26 463 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PAOXQ6QHF9 649 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 PAQR3Q6TCH7 311 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 CPNE9Q8IYJ1 553 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 SIDT2Q8NBJ9 832 aaKnown RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 WRAP53Q9BUR4 548 aaKnown RBP16.41■□□□□ 0.22
PCNX1-209ENST00000554879 MTG2Q9H4K7 406 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 AP4B1Q9Y6B7 739 aa16.41■□□□□ 0.22
PCNX1-209ENST00000554879 TMEM221A6NGB7 291 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 STK25O00506 426 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 MSH3P20585 1137 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 TPTEP56180 551 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 SFT2D3Q587I9 215 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 SERPINA9Q86WD7 417 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 STK40Q8N2I9 435 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 HCFC2Q9Y5Z7 792 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 A8MU76 341 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 POP4O95707 220 aaKnown RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 CTSOP43234 321 aaPredicted RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 KRT33BQ14525 404 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 NEDD8Q15843 81 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 WFDC5Q8TCV5 224 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 TDRD1Q9BXT4 1180 aaKnown RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 UBXN8O00124 270 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 ZDHHC11BP0C7U3 371 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 DDX39BQ13838 428 aaKnown RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 TTC33Q6PID6 262 aaPredicted RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 BNIPLQ7Z465 357 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 METTL3Q86U44 580 aaKnown RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF557Q8N988 423 aaPredicted RBP16.4■□□□□ 0.22
PCNX1-209ENST00000554879 ZFP28Q8NHY6 868 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 MYRFLQ96LU7 910 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 COPS8Q99627 209 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 OSBPL6Q9BZF3 934 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 MARCH7Q9H992 704 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 ZMYM5Q9UJ78 669 aa16.4■□□□□ 0.22
PCNX1-209ENST00000554879 PRR5-ARHGAP8B1AHC4 643 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 DLGAP3O95886 979 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 MRPS22P82650 360 aaKnown RBP16.39■□□□□ 0.22
PCNX1-209ENST00000554879 ARHGAP8P85298 464 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 TCEA2Q15560 299 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 TSNQ15631 228 aaKnown RBP16.39■□□□□ 0.22
PCNX1-209ENST00000554879 DOK6Q6PKX4 331 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 TIFABQ6ZNK6 161 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 PIWIL4Q7Z3Z4 852 aaKnown RBP16.39■□□□□ 0.22
PCNX1-209ENST00000554879 C7orf26Q96N11 449 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 SUV39H2Q9H5I1 410 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 PKD2L2Q9NZM6 624 aa16.39■□□□□ 0.22
PCNX1-209ENST00000554879 LINC01553A4QN01 128 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 TRIM24O15164 1050 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
PCNX1-209ENST00000554879 MTX2O75431 263 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 SLC25A14O95258 325 aaPredicted RBP16.39■□□□□ 0.21
PCNX1-209ENST00000554879 MAGP20916 626 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 TCEA1P23193 301 aaKnown RBP16.39■□□□□ 0.21
PCNX1-209ENST00000554879 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 TNFAIP8L3Q5GJ75 292 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 C2CD4AQ8NCU7 369 aaPredicted RBP16.39■□□□□ 0.21
PCNX1-209ENST00000554879 SEMA6AQ9H2E6 1030 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 WDR70Q9NW82 654 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 EPS15L1Q9UBC2 864 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 MGAMO43451 1857 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 FAM92AA1XBS5 289 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 GPR39O43194 453 aa16.39■□□□□ 0.21
PCNX1-209ENST00000554879 OR1I1O60431 355 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms