RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GPR182O15218 404 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZSCAN9O15535 394 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SPINT1O43278 529 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 HYAL3O43820 417 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MLYCDO95822 493 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LGI1O95970 557 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 APRTP07741 180 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PDGFRBP09619 1106 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TSPAN19P0C672 248 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF286BP0CG31 522 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ATF6P18850 670 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PTBP1P26599 531 aaKnown RBP eCLIP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC6A4P31645 630 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 EPHX2P34913 555 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 GMPRP36959 345 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CLCNKBP51801 687 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC35A2P78381 396 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 RAE1P78406 368 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 BASP1P80723 227 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TMPRSS15P98073 1019 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZBTB16Q05516 673 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TOP3AQ13472 1001 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SKIV2LQ15477 1246 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PTPRNQ16849 979 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MUM1Q2TAK8 710 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ARL13BQ3SXY8 428 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 RBM20Q5T481 1227 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 WSCD1Q658N2 575 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TPGS2Q68CL5 300 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 DUS1LQ6P1R4 473 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 HTR3DQ70Z44 454 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MAEAQ7L5Y9 396 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 IFNL1Q8IU54 200 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 GPIHBP1Q8IV16 184 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 HID1Q8IV36 788 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LAS2Q8IYD9 372 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CPXCR1Q8N123 301 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 FAM156AQ8NDB6 213 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PDZD8Q8NEN9 1154 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 UPF1Q92900 1129 aaKnown RBP eCLIP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ISOC1Q96CN7 298 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM121BQ9BXQ6 578 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM38AQ9H6F2 299 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 AKTIPQ9H8T0 292 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CLK4Q9HAZ1 481 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 IL21Q9HBE4 155 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ELOVL2Q9NXB9 296 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MARCH4Q9P2E8 410 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC2A6Q9UGQ3 507 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MAGEL2Q9UJ55 1249 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 DTNAQ9Y4J8 743 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TRAF6Q9Y4K3 522 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CSADQ9Y600 493 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 IRAK3Q9Y616 596 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 A0A1B0GTL3 188 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 MYADML2A6NDP7 307 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 VGLL3A8MV65 326 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 SEPT4O43236 478 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 PSIP1O75475 530 aaKnown RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 GPC4O75487 556 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 IGF2P01344 180 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ESR1P03372 595 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 FAM58BPP0C7Q3 252 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 TRAPPC2P0DI81 140 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 TRAPPC2BP0DI82 140 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 SRGAP2BP0DMP2 458 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 CKMT1AP12532 417 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 STMN1P16949 149 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ITGB7P26010 798 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 MAPK9P45984 424 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 STT3AP46977 705 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ARSDP51689 593 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 SLC5A3P53794 718 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 DLX5P56178 289 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 CSNK2BP67870 215 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ARF5P84085 180 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 MERTKQ12866 999 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 CSTF3Q12996 717 aaKnown RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 MAPK11Q15759 364 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 KCTD19Q17RG1 926 aaPredicted RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 MICAQ29983 383 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 FAM83EQ2M2I3 478 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF829Q3KNS6 432 aaPredicted RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 AGAP9Q5VTM2 703 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 AGAP7PQ5VUJ5 663 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 PRAMEF8Q5VWM4 474 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 PRAMEF7Q5VXH5 474 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ZDHHC20Q5W0Z9 365 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 KAZNQ674X7 775 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ESRP1Q6NXG1 681 aaKnown RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 CD200R1LQ6Q8B3 271 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 NECAB2Q7Z6G3 386 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 SYVN1Q86TM6 617 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 DEFB107AQ8IZN7 70 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 CLEC4FQ8N1N0 589 aa3.4□□□□□ -1.86
SEC23A-207ENST00000554615 NKAPQ8N5F7 415 aaKnown RBP3.4□□□□□ -1.86
SEC23A-207ENST00000554615 AGR3Q8TD06 166 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms