RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ATG16L1Q676U5 607 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TBC1D3GQ6DHY5 549 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TBC1D3CQ6IPX1 549 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 WDR93Q6P2C0 686 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 OLFML1Q6UWY5 402 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 SERPINA13PQ6UXR4 307 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TRIM72Q6ZMU5 477 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 R3HCC1LQ7Z5L2 792 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 BCDIN3DQ7Z5W3 292 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 SFR1Q86XK3 245 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 CEP97Q8IW35 865 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 NELFCDQ8IXH7 590 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TBC1D3Q8IZP1 549 aaPredicted RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 ZNF540Q8NDQ6 660 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 NEK11Q8NG66 645 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 MOSPD2Q8NHP6 518 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 GABPB2Q8TAK5 448 aaPredicted RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 GDAP1Q8TB36 358 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 FBXO30Q8TB52 745 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 DENND1AQ8TEH3 1009 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 FEM1CQ96JP0 617 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 CCDC42Q96M95 316 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM210AQ96ND0 272 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 HSD17B14Q9BPX1 270 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 RHOXF2Q9BQY4 288 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 REEP2Q9BRK0 252 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 ELOVL1Q9BW60 279 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 ACAT2Q9BWD1 397 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TSGA10Q9BZW7 698 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 KLK15Q9H2R5 256 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 RABEP2Q9H5N1 569 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 CDCP1Q9H5V8 836 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 ACAD9Q9H845 621 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 KCNK9Q9NPC2 374 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 EIF2B3Q9NR50 452 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 UTP6Q9NYH9 597 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 BAG5Q9UL15 447 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 FZD4Q9ULV1 537 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 PCDHGB4Q9UN71 923 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 TRAF3IP3Q9Y228 551 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 PCDHA10Q9Y5I2 948 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 GBF1Q92538 1859 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 WDFY4Q6ZS81 3184 aa5.28□□□□□ -1.56
MTHFD1-206ENST00000554353 BDP1A6H8Y1 2624 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 ASTN1O14525 1302 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 WDR81Q562E7 1941 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TARSL2A2RTX5 802 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 AGAP5A6NIR3 686 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 RSPH10B2B2RC85 870 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 BOLA2-SMG1P6H3BVE0 249 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 DDX39AO00148 427 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 CLIC1O00299 241 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 PDXKO00764 312 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 CASQ2O14958 399 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TGFB1I1O43294 461 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TXNL1O43396 289 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 GJB3O75712 270 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 SLITRK3O94933 977 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 MOCS3O95396 460 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 MT-CO3P00414 261 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 PGK1P00558 417 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 MBPP02686 304 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 SERPING1P05155 500 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 ATP5BP06576 529 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TUBBP07437 444 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 QDPRP09417 244 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 RSPH10BP0C881 870 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 HOXA13P31271 388 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 ACVRL1P37023 503 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 NNMTP40261 264 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 MAGEA1P43355 309 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 INHBCP55103 352 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 RPL15P61313 204 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 WDR5P61964 334 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 HOXA4Q00056 320 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 GFPT1Q06210 699 aaPredicted RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 GALNT2Q10471 571 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 KIF5AQ12840 1032 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 SPA17Q15506 151 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 NFIL3Q16649 462 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 KNOP1Q1ED39 458 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 C9orf50Q5SZB4 431 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 SNX30Q5VWJ9 437 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 SHQ1Q6PI26 577 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 TMEM65Q6PI78 240 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 C1orf186Q6ZWK4 172 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 NUP54Q7Z3B4 507 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 MMGT1Q8N4V1 131 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 AMER2Q8N7J2 671 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 OLIG1Q8TAK6 271 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 ERMNQ8TAM6 284 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 BADQ92934 168 aa5.27□□□□□ -1.57
MTHFD1-206ENST00000554353 RNF125Q96EQ8 232 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms