RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZNF669Q96BR6 464 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 MTBPQ96DY7 904 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CHFRQ96EP1 664 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SGSM3Q96HU1 749 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 EXOC2Q96KP1 924 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PWWP2AQ96N64 755 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KLHL32Q96NJ5 620 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 ZIM3Q96PE6 472 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TRIB3Q96RU7 358 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 LYSMD1Q96S90 227 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 GORASP1Q9BQQ3 440 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 FAM167BQ9BTA0 163 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 CHRAC1Q9NRG0 131 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 C20orf96Q9NUD7 363 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 NLE1Q9NVX2 485 aaPredicted RBP5□□□□□ -1.61
VTI1B-202ENST00000553619 SYBUQ9NX95 663 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 GFOD1Q9NXC2 390 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PRR13Q9NZ81 148 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 MOCS1Q9NZB8 636 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 PKD2L2Q9NZM6 624 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SENP1Q9P0U3 644 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TNFRSF10DQ9UBN6 386 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 APPL1Q9UKG1 709 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 DUSP12Q9UNI6 340 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 NCKAP1Q9Y2A7 1128 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TCAF1Q9Y4C2 921 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 KCTD3Q9Y597 815 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 SLC30A1Q9Y6M5 507 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 STON1Q9Y6Q2 735 aa5□□□□□ -1.61
VTI1B-202ENST00000553619 TCRBV9S1A1TA0A576 114 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 TSPAN11A1L157 253 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 FAM86C2PA6NEL3 165 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MROH6A6NGR9 719 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 FAM159BA6NKW6 160 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 C16orf96A6NNT2 1141 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 A6NNZ2 444 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 HMGB1P1B2RPK0 211 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 H0Y858 1186 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 H7C0S8 307 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 K7EQS6 105 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PSMD11O00231 422 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NEMP1O14524 444 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 RPP40O75818 363 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 VAPBO95292 243 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PIGNO95427 931 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 IL1BP01584 269 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 DNTTP04053 509 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 UGT2B4P06133 528 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 GSNP06396 782 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PYGLP06737 847 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ASGR2P07307 311 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PDHA1P08559 390 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 SNRPAP09012 282 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ATXN1LP0C7T5 689 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ACADMP11310 421 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 IL9P15248 144 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF16P17020 682 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 C5AR1P21730 350 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PSMA3P25788 255 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NMBRP28336 390 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PMLP29590 882 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 VIPR1P32241 457 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 SLC8A1P32418 973 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 HMGCLP35914 325 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 IL12RB1P42701 662 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 SOX9P48436 509 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NEK3P51956 506 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CSE1LP55060 971 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 STARD6P59095 220 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MSLNQ13421 630 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 GALNT3Q14435 633 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CRYMQ14894 314 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 FASTKD3Q14CZ7 662 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 UAP1Q16222 522 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CNGA3Q16281 694 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 TUBB8Q3ZCM7 444 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 FASTKD1Q53R41 847 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 C2orf27AQ580R0 203 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 AARS2Q5JTZ9 985 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 EGFLAMQ63HQ2 1017 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF776Q68DI1 518 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 FSTL4Q6MZW2 842 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MRNIPQ6NTE8 343 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NEPROQ6NW34 567 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ESRP1Q6NXG1 681 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CERS6Q6ZMG9 384 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 KIAA0408Q6ZU52 694 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ERN2Q76MJ5 926 aaKnown RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 KBTBD6Q86V97 674 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 IGDCC3Q8IVU1 814 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NRSN1Q8IZ57 195 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 STK40Q8N2I9 435 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MPP5Q8N3R9 675 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PPM1NQ8N819 430 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MDGA1Q8NFP4 955 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 OR6P1Q8NGX9 317 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 OR2T3Q8NH03 318 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 OR4L1Q8NH43 312 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 UHMK1Q8TAS1 419 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms