RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CAMK1DQ8IU85 385 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CHERPQ8IWX8 916 aaKnown RBP12.77□□□□□ -0.36
SHMT2-205ENST00000553474 MFSD2AQ8NA29 543 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 DCAF4L2Q8NA75 395 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 GRIN3AQ8TCU5 1115 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 NAT14Q8WUY8 206 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 LRTOMTQ8WZ04 291 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 PPWD1Q96BP3 646 aaKnown RBP12.77□□□□□ -0.36
SHMT2-205ENST00000553474 LINGO1Q96FE5 620 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 IGSF21Q96ID5 467 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 EXOC2Q96KP1 924 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CNBD2Q96M20 576 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 NSMCE3Q96MG7 304 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 CD274Q9NZQ7 290 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 LHX3Q9UBR4 397 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 APPL1Q9UKG1 709 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 PCDHA9Q9Y5H5 950 aa12.77□□□□□ -0.36
SHMT2-205ENST00000553474 DHRS12A0PJE2 317 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 LRRC14BA6NHZ5 514 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 H0Y626 953 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 EFCAB14O75071 495 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 SLC22A3O75751 556 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ZNF7P17097 686 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RGS4P49798 205 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CLCN7P51798 805 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ATXN3P54252 364 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PTPN5P54829 565 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RHOAP61586 193 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 TWF1Q12792 350 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 APOFQ13790 326 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 FXNQ16595 210 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ATP6AP1LQ52LC2 224 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 C9orf50Q5SZB4 431 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ARMC12Q5T9G4 340 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 THEMIS2Q5TEJ8 643 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 LAYNQ6UX15 382 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 SYVN1Q86TM6 617 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 GALNT4Q8N4A0 578 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 BCL7CQ8WUZ0 217 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ACDQ96AP0 544 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 KCNA7Q96RP8 456 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 FEM1AQ9BSK4 669 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ANKRD60Q9BZ19 345 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 COQ10BQ9H8M1 238 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CNOT6Q9ULM6 557 aaKnown RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ACTL7AQ9Y615 435 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RAD51BO15315 384 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ADAM12O43184 909 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 SOCS5O75159 536 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 NIPSNAP2O75323 286 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 SOD2P04179 222 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 S100BP04271 92 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 TFAP2AP05549 437 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PRSS56P0CW18 603 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ARSAP15289 507 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 FASP25445 335 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 GRIA2P42262 883 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RGS19P49795 217 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 POLR2JP52435 117 aaKnown RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PRKG2Q13237 762 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 MAP7Q14244 749 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RBBP7Q16576 425 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 C6orf52Q5T4I8 152 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RETSATQ6NUM9 610 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CYP2R1Q6VVX0 501 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 FRA10AC1Q70Z53 315 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CARM1Q86X55 608 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PROSER1Q86XN7 944 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 RBFAQ8N0V3 343 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 DPP10Q8N608 796 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CANT1Q8WVQ1 401 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 C9orf16Q9BUW7 83 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 C2orf49Q9BVC5 232 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 GPR63Q9BZJ6 419 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ALG2Q9H553 416 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 HEBP1Q9NRV9 189 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 AGPAT4Q9NRZ5 378 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PNPLA3Q9NST1 481 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 PTTG2Q9NZH5 202 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 GNPTGQ9UJJ9 305 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 YIPF1Q9Y548 306 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 OR51B4Q9Y5P0 310 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ST14Q9Y5Y6 855 aa12.76□□□□□ -0.37
SHMT2-205ENST00000553474 ARNTLO00327 626 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 GFRA2O00451 464 aa12.75□□□□□ -0.37
SHMT2-205ENST00000553474 AKAP10O43572 662 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms