RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 FGF3P11487 239 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CD1EP15812 388 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 GOT1P17174 413 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 RPA1P27694 616 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HOXD9P28356 352 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CXCR5P32302 372 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SLC8A1P32418 973 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PBX1P40424 430 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PEX3P56589 373 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PSMC1P62191 440 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CCL7P80098 99 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 GUCY1B3Q02153 619 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 LTBQ06643 244 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ADCY2Q08462 1091 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 RIPK1Q13546 671 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TRIM14Q14142 442 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 MYBPC3Q14896 1274 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 BMT2Q1RMZ1 405 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 DEFB109BQ30KR1 87 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 FAM214AQ32MH5 1076 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HNRNPA1L2Q32P51 320 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 GLE1Q53GS7 698 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 DRICH1Q6PGQ1 229 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 DSG4Q86SJ6 1040 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TRIM69Q86WT6 500 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TGIF2LYQ8IUE0 185 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SPATA2LQ8IUW3 424 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PHYKPLQ8IUZ5 450 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TMEM86AQ8N2M4 240 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 MMGT1Q8N4V1 131 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 NECAB1Q8N987 351 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SYT2Q8N9I0 419 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TC2NQ8N9U0 490 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 BOLLQ8N9W6 283 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 FAM98AQ8NCA5 519 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CHST14Q8NCH0 376 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CFAP61Q8NHU2 1237 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 MYCBPAPQ8TBZ2 947 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 WFDC5Q8TCV5 224 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 COG1Q8WTW3 980 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 IQCDQ96DY2 449 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HIST1H2AHQ96KK5 128 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 BMFQ96LC9 184 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 FAM210AQ96ND0 272 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 USP28Q96RU2 1077 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 WDR24Q96S15 920 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 FIZ1Q96SL8 496 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 KCNK16Q96T55 309 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HIST1H2AJQ99878 128 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SYT15Q9BQS2 421 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SLC2A11Q9BYW1 496 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CPEB1Q9BZB8 566 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CIPCQ9C0C6 399 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ZNF518BQ9C0D4 1074 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CLPBQ9H078 707 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TMEM60Q9H2L4 133 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TCEAL2Q9H3H9 227 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ZHX3Q9H4I2 956 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ASB7Q9H672 318 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HAUS4Q9H6D7 363 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ACTR5Q9H9F9 607 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 NMUR1Q9HB89 426 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 EPB41L5Q9HCM4 733 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TUFT1Q9NNX1 390 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 HOMER3Q9NSC5 361 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ING3Q9NXR8 418 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 DPP3Q9NY33 737 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 VPS18Q9P253 973 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 SIX4Q9UIU6 781 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TLK1Q9UKI8 766 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PILRAQ9UKJ1 303 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 INTS6Q9UL03 887 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PHTF1Q9UMS5 762 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PCDHA12Q9UN75 941 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 NAALADL1Q9UQQ1 740 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 CHST2Q9Y4C5 530 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 TNPO3Q9Y5L0 923 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 FAM169AQ9Y6X4 670 aa3.41□□□□□ -1.86
FOXN3-203ENST00000553353 PRRC2CQ9Y520 2896 aaKnown RBP3.41□□□□□ -1.86
FOXN3-203ENST00000553353 ANK3Q12955 4377 aaKnown RBP3.4□□□□□ -1.86
FOXN3-203ENST00000553353 SPTY2D1-AS1A0A0U1RR47 76 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 NEMP2A6NFY4 417 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 PRAMEF26H0Y7S4 382 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 RNF103O00237 685 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 PES1O00541 588 aaKnown RBP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 E2F3O00716 465 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 LIN7AO14910 233 aaPredicted RBP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 MDM4O15151 490 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 EIF3HO15372 352 aaKnown RBP eCLIP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 SLC16A4O15374 487 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 XPOTO43592 962 aaKnown RBP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 CCNT1O60563 726 aaKnown RBP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 MAGEC1O60732 1142 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 RNASEH2AO75792 299 aaKnown RBP3.4□□□□□ -1.87
FOXN3-203ENST00000553353 DNAJB5O75953 348 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 CNTN5O94779 1100 aa3.4□□□□□ -1.87
FOXN3-203ENST00000553353 NADKO95544 446 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms