RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MGST3O14880 152 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 SLC16A5O15375 505 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ZBTB43O43298 467 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 SSX4O60224 188 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TLR2O60603 784 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TOMM70O94826 608 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 G6PDP11413 515 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ITIH1P19827 911 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TYMPP19971 482 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ITGB8P26012 769 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 GABRA5P31644 462 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 PLA2G5P39877 138 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 PPP3CCP48454 512 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 CACNA2D1P54289 1103 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 STARD6P59095 220 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 MELKQ14680 651 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 CDO1Q16878 200 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ZXDCQ2QGD7 858 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-208ENST00000553278 LSM12Q3MHD2 195 aaKnown RBP5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TOR1AIP1Q5JTV8 583 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 C6orf10Q5SRN2 563 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 DCST1Q5T197 706 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 RNASEH2BQ5TBB1 312 aaKnown RBP5.7□□□□□ -1.5
SCFD1-208ENST00000553278 IRF2BP2Q7Z5L9 587 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 VRK3Q8IV63 474 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 DSELQ8IZU8 1212 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 RASGEF1CQ8N431 466 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 OCC1Q8TAD7 63 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 BBS10Q8TAM1 723 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ARRDC2Q8TBH0 407 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TBC1D16Q8TBP0 767 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 EME1Q96AY2 570 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 PRAM1Q96QH2 718 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 GFM1Q96RP9 751 aaKnown RBP5.7□□□□□ -1.5
SCFD1-208ENST00000553278 OLFM1Q99784 485 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 WDR83Q9BRX9 315 aaKnown RBP5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF350Q9GZX5 532 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 ABCG8Q9H221 673 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 FN3KQ9H479 309 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 KLHL31Q9H511 634 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM45AQ9NWC5 275 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 DPP3Q9NY33 737 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 APPL1Q9UKG1 709 aa5.7□□□□□ -1.5
SCFD1-208ENST00000553278 RNF103-CHMP3A0A140T963 221 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 SYCE3A1L190 88 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 C5orf52A6NGY3 159 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 RNF103O00237 685 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TXNL1O43396 289 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 DDHD2O94830 711 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 DANCRP0C864 163 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 MAKP20794 623 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 CTNNB1P35222 781 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 EIF2S3P41091 472 aaKnown RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 KCNJ1P48048 391 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 NME5P56597 212 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TUBA4AP68366 448 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 GAD2Q05329 585 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 ST3GAL1Q11201 340 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 FOXE3Q13461 319 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 RPS6KA1Q15418 735 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 PROSER3Q2NL68 480 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 EIF2S3LQ2VIR3 472 aaKnown RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF789Q5FWF6 425 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 MDH1BQ5I0G3 518 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 HECTD2Q5U5R9 776 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 FNDC7Q5VTL7 733 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 FIGLAQ6QHK4 219 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 PALB2Q86YC2 1186 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 CNTN4Q8IWV2 1026 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 LPCAT1Q8NF37 534 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 DBF4BQ8NFT6 615 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM163Q8TC26 289 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 HEXDCQ8WVB3 486 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 SPDL1Q96EA4 605 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 ZNF503Q96F45 646 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 BSCL2Q96G97 398 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 NLRP4Q96MN2 994 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 GAL3ST4Q96RP7 486 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 MYCBPQ99417 103 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 SH2D3AQ9BRG2 576 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TASP1Q9H6P5 420 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 THSD1Q9NS62 852 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 INTS10Q9NVR2 710 aaKnown RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 CPSF3Q9UKF6 684 aaKnown RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 BLOC1S6Q9UL45 172 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 STX8Q9UNK0 236 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TMEM184BQ9Y519 407 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-208ENST00000553278 SQORQ9Y6N5 450 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 ACEP12821 1306 aa5.69□□□□□ -1.5
SCFD1-208ENST00000553278 TRBV5-3A0A0A0MS03 114 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 SMIM30A4D0T7 59 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 ANKUB1A6NFN9 424 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 PPP6CO00743 305 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 HS3ST1O14792 307 aa5.68□□□□□ -1.5
SCFD1-208ENST00000553278 BCAS2O75934 225 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-208ENST00000553278 RAB40ALP0C0E4 278 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms