RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 JCHAINP01591 159 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 MT-ND3P03897 115 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 HLA-DQB2P05538 268 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 CCDC175P0C221 793 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 TCF4P15884 667 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 TYRP1P17643 537 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 IDSP22304 550 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PDE1BQ01064 536 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 SLC25A11Q02978 314 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 KLRB1Q12918 225 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 DPYSL3Q14195 570 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 GALNT3Q14435 633 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PAFAH1B3Q15102 231 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PCSK7Q16549 785 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 ERCC6LQ2NKX8 1250 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 TXNRD3NBQ6F5E7 133 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 IRGCQ6NXR0 463 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 KLHL35Q6PF15 583 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 ARHGAP22Q7Z5H3 698 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 LRRTM4Q86VH4 590 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 CNGA4Q8IV77 575 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 MAML1Q92585 1016 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 OR6C1Q96RD1 312 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 SRPK1Q96SB4 655 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 TBC1D10AQ9BXI6 508 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 TRIM39Q9HCM9 518 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PDE7BQ9NP56 450 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PRDM8Q9NQV8 689 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 PDP2Q9P2J9 529 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 POLHQ9Y253 713 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 LUC7L2Q9Y383 392 aaKnown RBP8.58□□□□□ -1.04
TMEM116-217ENST00000552801 HEY1Q9Y5J3 304 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 ST14Q9Y5Y6 855 aa8.58□□□□□ -1.04
TMEM116-217ENST00000552801 CFAP46Q8IYW2 2715 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TENM4Q6N022 2769 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 PIPSLA2A3N6 862 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 CDC14CA4D256 554 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 PRR19A6NJB7 356 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 KCNK1O00180 336 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 LCE2BO14633 110 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 PPP1R12AO14974 1030 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TOX3O15405 576 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 NDUFA10O95299 355 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 EML2O95834 649 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 CD48P09326 243 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 H2AFZP0C0S5 128 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 STAT5AP42229 794 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TUBB4BP68371 445 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 MAP7Q14244 749 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ERV3-1Q14264 604 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 IL11RAQ14626 422 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 PLCL1Q15111 1095 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 HENMT1Q5T8I9 393 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 CACHD1Q5VU97 1274 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 NCBP2-AS2Q69YL0 99 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 PDPK2PQ6A1A2 396 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ARMC6Q6NXE6 501 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ALKBH5Q6P6C2 394 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TMEM26Q6ZUK4 368 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 H2AFVQ71UI9 128 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 VASH1Q7L8A9 365 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 NT5DC3Q86UY8 548 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TRAPPC5Q8IUR0 188 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 RBM12BQ8IXT5 1001 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TRAM1L1Q8N609 369 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 BMPERQ8N8U9 685 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 MNS1Q8NEH6 495 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 UBXN4Q92575 508 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 SYN2Q92777 582 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 FATE1Q969F0 183 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TSGA13Q96PP4 275 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 SMIM14Q96QK8 99 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 WDR24Q96S15 920 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 LYSMD1Q96S90 227 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ZCCHC2Q9C0B9 1178 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TWSG1Q9GZX9 223 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 APMAPQ9HDC9 416 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ARFGAP3Q9NP61 516 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 POT1Q9NUX5 634 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ZNHIT6Q9NWK9 470 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ANKMY1Q9P2S6 941 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 UVRAGQ9P2Y5 699 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 ATXN10Q9UBB4 475 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 CROTQ9UKG9 612 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 SHOC2Q9UQ13 582 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 MAN2B2Q9Y2E5 1009 aa8.57□□□□□ -1.04
TMEM116-217ENST00000552801 TMEM184BQ9Y519 407 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 V9GYY5 206 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-217ENST00000552801 SPTA1P02549 2419 aa8.56□□□□□ -1.04
TMEM116-217ENST00000552801 A0A1W2PQJ5 194 aa8.56□□□□□ -1.04
TMEM116-217ENST00000552801 LRRD1A4D1F6 860 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms