RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 CAV1Q03135 178 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 ELAVL2Q12926 359 aaKnown RBP20.82■□□□□ 0.92
NPAS3-210ENST00000551492 GPS1Q13098 491 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 CAMK1Q14012 370 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 TBCCQ15814 346 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 KIAA0408Q6ZU52 694 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 SPATC1Q76KD6 591 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 USP13Q92995 863 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-210ENST00000551492 FAM124BQ9H5Z6 455 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-210ENST00000551492 ZNF334Q9HCZ1 680 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-210ENST00000551492 FANCFQ9NPI8 374 aa20.82■□□□□ 0.92
NPAS3-210ENST00000551492 PAGE1O75459 146 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 LRIG2O94898 1065 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 SNRPAP09012 282 aaKnown RBP20.81■□□□□ 0.92
NPAS3-210ENST00000551492 LAG3P18627 525 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 CHI3L2Q15782 390 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 CHSY1Q86X52 802 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 PHTF2Q8N3S3 785 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 OR2T34Q8NGX1 318 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 TRIM63Q969Q1 353 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 NT5C3BQ969T7 300 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 ZNF221Q9UK13 617 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 YBX2Q9Y2T7 364 aaKnown RBP20.81■□□□□ 0.92
NPAS3-210ENST00000551492 YIPF1Q9Y548 306 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 PRSS51A0A1B0GVH4 220 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 OR5K3A6NET4 321 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 HTRA2O43464 458 aaPredicted RBP20.81■□□□□ 0.92
NPAS3-210ENST00000551492 PGRP06401 933 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 CKMT2P17540 419 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 SERPINB5P36952 375 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 LRRC38Q5VT99 294 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 NAT16Q8N8M0 369 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 FAM156AQ8NDB6 213 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 MZB1Q8WU39 189 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 LRTOMTQ8WZ04 291 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 ATP6V1E2Q96A05 226 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 RAD9AQ99638 391 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 NTN4Q9HB63 628 aa20.81■□□□□ 0.92
NPAS3-210ENST00000551492 PLXNA4Q9HCM2 1894 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 H7C4K7 107 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 CLK1P49759 484 aaKnown RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ZNF33BQ06732 778 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 PAGE2BQ5JRK9 111 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ARNTL2Q8WYA1 636 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 PAFAH2Q99487 392 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 IFT22Q9H7X7 185 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ABCB10Q9NRK6 738 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 PKD2L2Q9NZM6 624 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 DPP7Q9UHL4 492 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 TTC24A2A3L6 582 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 EEF2KO00418 725 aaKnown RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 RAD51BO15315 384 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 KCNN4O15554 427 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 CNTN5O94779 1100 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ERCC2P18074 760 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 NUDT1P36639 197 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ZXDBP98169 803 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 DBPQ10586 325 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 AQP6Q13520 282 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 CBX2Q14781 532 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 DNAJB7Q7Z6W7 309 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ZNF354CQ86Y25 554 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 CMTR2Q8IYT2 770 aaKnown RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 LINC00518Q8N0U6 118 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ST8SIA2Q92186 375 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 SLCO2A1Q92959 643 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 FCRL2Q96LA5 508 aaPredicted RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 MRPL39Q9NYK5 338 aaKnown RBP20.8■□□□□ 0.92
NPAS3-210ENST00000551492 FBXW11Q9UKB1 542 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 PSME2Q9UL46 239 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 ACTL7AQ9Y615 435 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 PMF1-BGLAPU3KQ54 211 aa20.8■□□□□ 0.92
NPAS3-210ENST00000551492 LRRC72A6NJI9 287 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 CFLARO15519 480 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 TSPAN3O60637 253 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 EFEMP2O95967 443 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 BMP4P12644 408 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 TUBB3Q13509 450 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 EFHC2Q5JST6 749 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 ANKRD22Q5VYY1 191 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 ZCCHC9Q8N567 271 aaKnown RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 SNX8Q9Y5X2 465 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 EPCAMP16422 314 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 HMGA1P17096 107 aaKnown RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 NCF2P19878 526 aaPredicted RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 PIK3R1P27986 724 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 HERC3Q15034 1050 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 MTX3Q5HYI7 312 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 RAP1GAP2Q684P5 730 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 KDELC2Q7Z4H8 507 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 DDX53Q86TM3 631 aaKnown RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 SPPL2BQ8TCT7 592 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 SNX18Q96RF0 628 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 SSU72Q9NP77 194 aaKnown RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 DUS2Q9NX74 493 aaKnown RBP20.79■□□□□ 0.92
NPAS3-210ENST00000551492 MARCH2Q9P0N8 246 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 PCDHGB3Q9Y5G1 929 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 WDR87Q6ZQQ6 2873 aa20.79■□□□□ 0.92
NPAS3-210ENST00000551492 AIM2O14862 343 aa20.78■□□□□ 0.92
NPAS3-210ENST00000551492 PI15O43692 258 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms