RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TRIM3O75382 744 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 DAB1O75553 588 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CNTN5O94779 1100 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 RHOBTB1O94844 696 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 INMTO95050 263 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 MFN2O95140 757 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GCNT3O95395 438 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PIGNO95427 931 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 F9P00740 461 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PRLP01236 227 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CD4P01730 458 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GCP02774 474 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KRT1P04264 644 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 UMPSP11172 480 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ENO3P13929 434 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TCF4P15884 667 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ACO1P21399 889 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CBLP22681 906 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 FASP25445 335 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 RPL9P32969 192 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SERPINB5P36952 375 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TGFBR2P37173 567 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 YAP1P46937 504 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 RFX2P48378 723 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KCNC1P48547 511 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CLK1P49759 484 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 NOMO3P69849 1222 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TEKQ02763 1124 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 UBE3AQ05086 875 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CHRNDQ07001 517 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CETN1Q12798 172 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 BMPR2Q13873 1038 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 EFR3AQ14156 821 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 STARD3Q14849 445 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 POLD3Q15054 466 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 AOC3Q16853 763 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KIZQ2M2Z5 673 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 DALRD3Q5D0E6 543 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 LIN9Q5TKA1 542 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PIK3R6Q5UE93 754 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CDCP2Q5VXM1 449 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 FCRLBQ6BAA4 426 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 FIP1L1Q6UN15 594 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TFAP2EQ6VUC0 442 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNF704Q6ZNC4 412 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CHST15Q7LFX5 561 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PRSS42Q7Z5A4 293 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 R3HCC1LQ7Z5L2 792 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CCDC190Q86UF4 302 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 DHFR2Q86XF0 187 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PTRH1Q86Y79 214 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 MAPKAPK5Q8IW41 473 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CDH26Q8IXH8 852 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 THNSL1Q8IYQ7 743 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PM20D2Q8IYS1 436 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ANKRD52Q8NB46 1076 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KDM1BQ8NB78 822 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM156AQ8NDB6 213 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM83FQ8NEG4 500 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ZSWIM2Q8NEG5 633 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 OR10T2Q8NGX3 314 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 NDNFQ8TB73 568 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 LRRC20Q8TCA0 184 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 BCL7CQ8WUZ0 217 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TMEM40Q8WWA1 233 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KLHL6Q8WZ60 621 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GTF2H4Q92759 462 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PROX1Q92786 737 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GJA10Q969M2 543 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CIDECQ96AQ7 238 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 REPS1Q96D71 796 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ATG4CQ96DT6 458 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 PDLIM5Q96HC4 596 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KLHL15Q96M94 604 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 C8orf37Q96NL8 207 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 MUS81Q96NY9 551 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 OR2A14Q96R47 310 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CYP2S1Q96SQ9 504 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 EBNA1BP2Q99848 306 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 KCTD14Q9BQ13 255 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 LXNQ9BS40 222 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CCDC32Q9BV29 185 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GATA5Q9BWX5 397 aaPredicted RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ROGDIQ9GZN7 287 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 IL22Q9GZX6 179 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SDCBP2Q9H190 292 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 VPS33BQ9H267 617 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CAPN10Q9HC96 672 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 MRPL47Q9HD33 250 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GIMAP4Q9NUV9 329 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 TBC1D13Q9NVG8 400 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 INTS10Q9NVR2 710 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SYBUQ9NX95 663 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC39A1Q9NY26 324 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 GGA3Q9NZ52 723 aa5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 CCDC59Q9P031 241 aaKnown RBP5.25□□□□□ -1.57
LSM3P2-201ENST00000551246 ACTR3BQ9P1U1 418 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms