RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PTRH1Q86Y79 214 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ABI1Q8IZP0 508 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 LGI4Q8N135 537 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 OR6S1Q8NH40 331 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CHTF18Q8WVB6 975 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CCDC114Q96M63 670 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 GCNAQ96QF7 691 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TRIM7Q9C029 511 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PCBD2Q9H0N5 130 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 FAM49AQ9H0Q0 323 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 IL21RQ9HBE5 538 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 OXSMQ9NWU1 459 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CPNE7Q9UBL6 633 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 VPS51Q9UID3 782 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF639Q9UID6 485 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HEBP2Q9Y5Z4 205 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 IGLV3-12A0A075B6K2 115 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF891A8MT65 544 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 BBIP1A8MTZ0 92 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 KCNK3O14649 394 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 RAMP2O60895 175 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CXCL14O95715 111 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TIMP2P16035 220 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 FGFR4P22455 802 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 FASLGP48023 281 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ABATP80404 500 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 GTF2H3Q13889 308 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PRKG1Q13976 671 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TERF2Q15554 542 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ITPRIPL2Q3MIP1 535 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SIRPB2Q5JXA9 342 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 FAM46CQ5VWP2 391 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 IZUMO3Q5VZ72 239 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SLC30A8Q8IWU4 369 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 GBP7Q8N8V2 638 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 KCTD6Q8NC69 237 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 OR2L2Q8NH16 312 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZFP28Q8NHY6 868 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HMCESQ96FZ2 354 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 DHRS1Q96LJ7 313 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SEPT5Q99719 369 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 MRPL57Q9BQC6 102 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 DESI2Q9BSY9 194 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SPRY4Q9C004 299 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PRDM12Q9H4Q4 367 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 WDR41Q9HAD4 459 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 VANGL2Q9ULK5 521 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HES2Q9Y543 173 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 IQANK1A0A1B0GTG1 560 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TRIM64CA6NLI5 447 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF839A8K0R7 811 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ANKRD66B4E2M5 251 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 E2F3O00716 465 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HRO43593 1189 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PCDHGA12O60330 932 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 MMP20O60882 483 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HTR3BO95264 441 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 POLBP06746 335 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CD48P09326 243 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 KRT5P13647 590 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 DRD3P35462 400 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TRA2AQ13595 282 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 AAK1Q2M2I8 961 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 HKDC1Q2TB90 917 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 PIGGQ5H8A4 983 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 LRIF1Q5T3J3 769 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF517Q6ZMY9 492 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 DSG4Q86SJ6 1040 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 TESCQ96BS2 214 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 ZBTB10Q96DT7 871 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 MYEOVQ96EZ4 313 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 LRRC3BQ96PB8 259 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 SLC13A1Q9BZW2 595 aa4.83□□□□□ -1.64
SCAF11-212ENST00000549162 APOBEC2Q9Y235 224 aaKnown RBP4.83□□□□□ -1.64
SCAF11-212ENST00000549162 CASTOR2A6NHX0 329 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 WASHC1A8K0Z3 465 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 TBX1O43435 398 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 LRG1P02750 347 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 BRAFP15056 766 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SYN1P17600 705 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GPR3P46089 330 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SPINT3P49223 89 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RAP1GDS1P52306 607 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RBM10P98175 930 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SEMG2Q02383 582 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 RUNX3Q13761 415 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GRB7Q14451 532 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ARHGAP44Q17R89 818 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF284Q2VY69 593 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 LIPJQ5W064 366 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 OR6B2Q6IFH4 312 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 MZT2AQ6P582 158 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 DND1Q8IYX4 353 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 SPEM1Q8N4L4 309 aa4.82□□□□□ -1.64
SCAF11-212ENST00000549162 GPATCH1Q9BRR8 931 aaKnown RBP4.82□□□□□ -1.64
SCAF11-212ENST00000549162 CRB3Q9BUF7 120 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms