RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GP1BBP13224 206 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC8A1P32418 973 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 CHRNA4P43681 627 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 SERPINB8P50452 374 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 PDE1BQ01064 536 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 NSUN2Q08J23 767 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 PCSK7Q16549 785 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 HNRNPA1L2Q32P51 320 aaKnown RBP19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 SIRPB2Q5JXA9 342 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 KIAA0408Q6ZU52 694 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 GALNT7Q86SF2 657 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 CALML6Q8TD86 181 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 MYO19Q96H55 970 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 ZNF778Q96MU6 729 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 FAM111AQ96PZ2 611 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 ELAC2Q9BQ52 826 aaKnown RBP19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 PITPNM3Q9BZ71 974 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 RHOJQ9H4E5 214 aa19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 IARS2Q9NSE4 1012 aaKnown RBP19.82■□□□□ 0.76
CTDSP2-204ENST00000548823 SUV39H1O43463 412 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 LZTS3O60299 673 aaPredicted RBP19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 NDST3O95803 873 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 GP1BAP07359 652 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 ADPRHP54922 357 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 ST8SIA6P61647 398 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 CYTH1Q15438 398 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 ESRP1Q6NXG1 681 aaKnown RBP19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 LCA5Q86VQ0 697 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 MMAAQ8IVH4 418 aaKnown RBP19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 DCAF4L2Q8NA75 395 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 OR14C36Q8NHC7 312 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 SPOCK2Q92563 424 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 ALG14Q96F25 216 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 IFT43Q96FT9 208 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 NUDCD1Q96RS6 583 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 TRIB3Q96RU7 358 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 AGAP2Q99490 1192 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 MUC3BQ9H195 1237 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 PCMTD2Q9NV79 361 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC17A6Q9P2U8 582 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 SATB2Q9UPW6 733 aa19.81■□□□□ 0.76
CTDSP2-204ENST00000548823 TPP1O14773 563 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 INSIG1O15503 277 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC7A4O43246 635 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 ARNTP27540 789 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 SERPINB4P48594 390 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 ARF5P84085 180 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 ACVR1Q04771 509 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 LINC00303Q3SY05 128 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 C3orf38Q5JPI3 329 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 CDHR3Q6ZTQ4 885 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 SPATA21Q7Z572 469 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC25A41Q8N5S1 370 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 GPR22Q99680 433 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 FEM1AQ9BSK4 669 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 ABCG4Q9H172 646 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 MANSC1Q9H8J5 431 aa19.8■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3DA0A087WVF3 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3IA0A087WXS9 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3EA0A087X179 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3KA0A087X1G2 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3FA6NER0 549 aaPredicted RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3LB9A6J9 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3HP0C7X1 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 DGKAP23743 735 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PSMA3P25788 255 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TYK2P29597 1187 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 CD70P32970 193 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 NUDT1P36639 197 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PLK1P53350 603 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PPP2CBP62714 309 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PPP2CAP67775 309 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 THOC5Q13769 683 aaKnown RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PDE1CQ14123 709 aaPredicted RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 CNGA3Q16281 694 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 ISXQ2M1V0 245 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 C9orf64Q5T6V5 341 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3GQ6DHY5 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3CQ6IPX1 549 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 ZC3HC1Q86WB0 502 aaKnown RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 TBC1D3Q8IZP1 549 aaPredicted RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 CARNMT1Q8N4J0 409 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 AADATQ8N5Z0 425 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 C2CD4AQ8NCU7 369 aaPredicted RBP19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 VPS39Q96JC1 886 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 SNX15Q9NRS6 342 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 IL1RAPL1Q9NZN1 696 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 PHTF1Q9UMS5 762 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 DMTF1Q9Y222 760 aa19.79■□□□□ 0.76
CTDSP2-204ENST00000548823 VAPBO95292 243 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 CD160O95971 181 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 NFKB2Q00653 900 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC12A1Q13621 1099 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 SEPT6Q14141 434 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 ZNF557Q8N988 423 aaPredicted RBP19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 KDM1BQ8NB78 822 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 FIBINQ8TAL6 211 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 WFDC5Q8TCV5 224 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 ZNF398Q8TD17 642 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 BRSK1Q8TDC3 778 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms