RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	CCDC189	A1A4V9	331 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	HBP1	O60381	514 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	ATP2C2	O75185	946 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	NDUFS7	O75251	213 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	BAIAP3	O94812	1187 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	LDHA	P00338	332 aa	Known RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	GH2	P01242	217 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	CD4	P01730	458 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	ZNF883	P0CG24	379 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	MYOG	P15173	224 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	HNF1B	P35680	557 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	IL15	P40933	162 aa	Predicted RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	MECOM	Q03112	1051 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	SLC20A2	Q08357	652 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	MVP	Q14764	893 aa	Known RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	BRD3	Q15059	726 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	PLEKHA7	Q6IQ23	1121 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	CES5A	Q6NT32	575 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	RINL	Q6ZS11	566 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	DGLUCY	Q7Z3D6	616 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	CHD1L	Q86WJ1	897 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	HERC6	Q8IVU3	1022 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	SFTPA2	Q8IWL1	248 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	DNAAF1	Q8NEP3	725 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	DBF4B	Q8NFT6	615 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	TMEM19	Q96HH6	336 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	ELAC2	Q9BQ52	826 aa	Known RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	CSTL1	Q9H114	145 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	BICC1	Q9H694	974 aa	Known RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	G6PC2	Q9NQR9	355 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	RAI14	Q9P0K7	980 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	NDRG3	Q9UGV2	375 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	ZHX1	Q9UKY1	873 aa	Predicted RBP	3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	VDAC3	Q9Y277	283 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	IL16	Q14005	1332 aa		3.59	□□□□□ -1.83
RPAP3-205	ENST00000548211	CACNA1H	O95180	2353 aa		3.59	□□□□□ -1.84
RPAP3-205	ENST00000548211	SI	P14410	1827 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	MYH8	P13535	1937 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	SOCS6	O14544	535 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	FLOT1	O75955	427 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	IL9	P15248	144 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	SRD5A1	P18405	259 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	PTMS	P20962	102 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	CDKN1A	P38936	164 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	CCL23	P55773	120 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	HDAC4	P56524	1084 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	TNFAIP2	Q03169	654 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	FOXD4	Q12950	439 aa	Predicted RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	ITGA7	Q13683	1181 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	SOWAHA	Q2M3V2	549 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	AMZ1	Q400G9	498 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	ACCSL	Q4AC99	568 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	NAA16	Q6N069	864 aa	Predicted RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	TATDN1	Q6P1N9	297 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	ODF3L1	Q8IXM7	274 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	NME8	Q8N427	588 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	WDSUB1	Q8N9V3	476 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	ZMIZ2	Q8NF64	920 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	PRSS33	Q8NF86	280 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	GDPD5	Q8WTR4	605 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	NSUN4	Q96CB9	384 aa	Known RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	TGS1	Q96RS0	853 aa	Known RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	NAP1L4	Q99733	375 aa	Known RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	FTO	Q9C0B1	505 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	UPF3A	Q9H1J1	476 aa	Known RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	CDC14A	Q9UNH5	594 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	LRCH1	Q9Y2L9	728 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	COL4A4	P53420	1690 aa	Predicted RBP	3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	SIPA1L1	O43166	1804 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	MCM3AP	O60318	1980 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	TECTA	O75443	2155 aa		3.58	□□□□□ -1.84
RPAP3-205	ENST00000548211	TMEM221	A6NGB7	291 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211		M0R296	226 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	WDR46	O15213	610 aa	Known RBP	3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	EDIL3	O43854	480 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	MYL1	P05976	194 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	UQCRFS1P1	P0C7P4	283 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	HLA-DOB	P13765	273 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	FLT1	P17948	1338 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	REL	Q04864	619 aa	Predicted RBP	3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	TP53BP1	Q12888	1972 aa	Predicted RBP	3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	CUL4B	Q13620	913 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	ACVR2B	Q13705	512 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	DHX8	Q14562	1220 aa	Known RBP	3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	CCDC6	Q16204	474 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	SLC18A3	Q16572	532 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	SYT16	Q17RD7	645 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	TIGD6	Q17RP2	521 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	SYCP2L	Q5T4T6	812 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	TANGO2	Q6ICL3	276 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	WDR73	Q6P4I2	378 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	B3GNT6	Q6ZMB0	384 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	DEFB128	Q7Z7B8	93 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	MYPOP	Q86VE0	399 aa	Predicted RBP	3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	KMT2E	Q8IZD2	1858 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	SAMD3	Q8N6K7	520 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	GPATCH11	Q8N954	259 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	SPATA5	Q8NB90	893 aa		3.57	□□□□□ -1.84
RPAP3-205	ENST00000548211	OR6Y1	Q8NGX8	325 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms