RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GABPB2Q8TAK5 448 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 BPIFB1Q8TDL5 484 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 RCN3Q96D15 328 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ERVK-6Q9BXR3 956 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 TUBB1Q9H4B7 451 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 FARSBQ9NSD9 589 aaKnown RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ELOVL2Q9NXB9 296 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 FADS2P1A8MWK0 482 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CCNT2O60583 730 aaKnown RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 SNX2O60749 519 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 OR4F21O95013 312 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 WISP3O95389 354 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 APOA4P06727 396 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 TPBGLP0DKB5 382 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ITGALP20701 1170 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 OGNP20774 298 aaKnown RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ACRV1P26436 265 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CCR7P32248 378 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 DIO3P55073 304 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 CLCQ05315 142 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 IER5LQ5T953 404 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 COL13A1Q5TAT6 717 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 SLC22A15Q8IZD6 547 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 RAB3IL1Q8TBN0 382 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 STAG3L4Q8TBR4 150 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 ATP6V1E2Q96A05 226 aa11.81□□□□□ -0.52
CCDC38-202ENST00000546386 NOL11Q9H8H0 719 aaKnown RBP11.81□□□□□ -0.52
CCDC38-202ENST00000546386 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 C5orf67F2Z3F1 127 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 H3BQ06 376 aaPredicted RBP11.8□□□□□ -0.52
CCDC38-202ENST00000546386 MMP20O60882 483 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 EPHX1P07099 455 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 TIMP2P16035 220 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 SPAM1P38567 509 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PDE12Q6L8Q7 609 aaKnown RBP11.8□□□□□ -0.52
CCDC38-202ENST00000546386 VITQ6UXI7 678 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 TPRG1Q6ZUI0 275 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PARS2Q7L3T8 475 aaKnown RBP11.8□□□□□ -0.52
CCDC38-202ENST00000546386 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 TUBGCP3Q96CW5 907 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 MYADMQ96S97 322 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 HEPHQ9BQS7 1158 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 HGH1Q9BTY7 390 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 ATG10Q9H0Y0 220 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PIF1Q9H611 641 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 HPS4Q9NQG7 708 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 INTS10Q9NVR2 710 aaKnown RBP11.8□□□□□ -0.52
CCDC38-202ENST00000546386 DEC1Q9P2X7 70 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 TMEM114B3SHH9 223 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 LATO43561 262 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 CISD3P0C7P0 127 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 COX4I1P13073 169 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PIK3R1P27986 724 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PTGER3P43115 390 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 COPAP53621 1224 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 ERVK-21P61565 698 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 ABRQ12979 859 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 SYCE2Q6PIF2 218 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 DOK6Q6PKX4 331 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 SNX20Q7Z614 316 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 AHI1Q8N157 1196 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 NXPE1Q8N323 547 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PPFIBP2Q8ND30 876 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 PYDC1Q8WXC3 89 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 P2RY12Q9H244 342 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 AKTIPQ9H8T0 292 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 IL36AQ9UHA7 158 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 SLC7A8Q9UHI5 535 aa11.8□□□□□ -0.52
CCDC38-202ENST00000546386 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
CCDC38-202ENST00000546386 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ARHGAP10A1A4S6 786 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 GPC4O75487 556 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 PYGLP06737 847 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF7P17097 686 aaPredicted RBP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 GDI1P31150 447 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 SPINT3P49223 89 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 HTR6P50406 440 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CTSCP53634 463 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF234Q14588 700 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 SLC14A2Q15849 920 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CCDC6Q16204 474 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 KIF19Q2TAC6 998 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 AGKQ53H12 422 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ISLR2Q6UXK2 745 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ACAD11Q709F0 780 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 SYVN1Q86TM6 617 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 HMGCLL1Q8TB92 370 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 RDH11Q8TC12 318 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 SMARCD2Q92925 531 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 KIAA1191Q96A73 305 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 TEX37Q96LM6 180 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 TTC1Q99614 292 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 SYTL2Q9HCH5 934 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 DNAJC28Q9NX36 388 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 TBC1D14Q9P2M4 693 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms