RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CSRP3P50461 194 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 BLKP51451 505 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 AFF3P51826 1226 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 RAB10P61026 200 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 USP10Q14694 798 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 TMED2Q15363 201 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 TEAD4Q15561 434 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 PLK5Q496M5 336 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 HECTD2Q5U5R9 776 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 LDB1Q86U70 411 aaPredicted RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 TRABD2AQ86V40 505 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC41A1Q8IVJ1 513 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 PELI3Q8N2H9 469 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 DCLK2Q8N568 766 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 GPATCH11Q8N954 259 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 C1orf216Q8TAB5 229 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SNX19Q92543 992 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 KLK6Q92876 244 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 KLHDC7BQ96G42 594 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 TIMM29Q9BSF4 260 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 EBF2Q9HAK2 575 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SPATS2LQ9NUQ6 558 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC17A6Q9P2U8 582 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 ANKRD6Q9Y2G4 727 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 OAS3Q9Y6K5 1087 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 DGKBQ9Y6T7 804 aa15.8■□□□□ 0.12
PRPF40A-212ENST00000545856 A0A087X1B8 175 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 HMX2A2RU54 273 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 POM121BA6NF01 834 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 KMOO15229 486 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 INPP4BO15327 924 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 GPR39O43194 453 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 OR1I1O60431 355 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 MT-ND3P03897 115 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 GSTA1P08263 222 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 BCKDHBP21953 392 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 KPNA2P52292 529 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 DMPKQ09013 629 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 RPA4Q13156 261 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 ZNF789Q5FWF6 425 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 CTSL3PQ5NE16 218 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 PLEKHS1Q5SXH7 462 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 MROH9Q5TGP6 573 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 ZNF549Q6P9A3 640 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 LRRTM4Q86VH4 590 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 NKAPQ8N5F7 415 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 OR56A4Q8NGH8 313 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 ELMO2Q96JJ3 720 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 BOCQ9BWV1 1114 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 KCNH6Q9H252 994 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 ATXN10Q9UBB4 475 aa15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 TRMT6Q9UJA5 497 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 MTO1Q9Y2Z2 717 aaKnown RBP15.79■□□□□ 0.12
PRPF40A-212ENST00000545856 SPTY2D1-AS1A0A0U1RR47 76 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 A0A1B0GTW7 788 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 A0A1W2PR77 199 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 LIN7AO14910 233 aaPredicted RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 VILLO15195 856 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 ASMTLO95671 621 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 ALDOAP04075 364 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 THEGLP0DJG4 465 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TYK2P29597 1187 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 FMO4P31512 558 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 CCNFP41002 786 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 RGS4P49798 205 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 CLCNKAP51800 687 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 PDAP1Q13442 181 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 INSCQ1MX18 579 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TSNAXIP1Q2TAA8 658 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 Q6ZSR6 202 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 NEK10Q6ZWH5 1172 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 CEP68Q76N32 757 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 OTOAQ7RTW8 1153 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 GALNT13Q8IUC8 556 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 SDR16C5Q8N3Y7 309 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 FRMD1Q8N878 549 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 RASGEF1AQ8N9B8 481 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 CEP76Q8TAP6 659 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 HM13Q8TCT9 377 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 ASZ1Q8WWH4 475 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 INPP5DQ92835 1189 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 MRRFQ96E11 262 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 PDLIM5Q96HC4 596 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 ATP6V1G3Q96LB4 118 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 CCM2Q9BSQ5 444 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 OR2AG1Q9H205 316 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 ERVMER34-1Q9H9K5 563 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TM9SF3Q9HD45 589 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 FZD3Q9NPG1 666 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 AASDHPPTQ9NRN7 309 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 SNX15Q9NRS6 342 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TRNAU1APQ9NX07 287 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TBK1Q9UHD2 729 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 EIF2B4Q9UI10 523 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 TLK1Q9UKI8 766 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC39A10Q9ULF5 831 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 DHRS7Q9Y394 339 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 OR1A2Q9Y585 309 aa15.78■□□□□ 0.12
PRPF40A-212ENST00000545856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SMIM23A6NLE4 172 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms