RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SNX6Q9UNH7 406 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 CITO14578 2027 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 LOC100506127A0A0U1RQW1 187 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PPEF2O14830 753 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 NTRK1P04629 796 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 S100A5P33763 92 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 GRK3P35626 688 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 CHRNA4P43681 627 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 GABARAPL2P60520 117 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 RBP5P82980 135 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 GALK2Q01415 458 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 SELPLGQ14242 412 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 ZNF678Q5SXM1 525 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 RAP1GAP2Q684P5 730 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PIM3Q86V86 326 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 SLC22A9Q8IVM8 553 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 RIMKLAQ8IXN7 391 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 TBCDQ9BTW9 1192 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 BEX2Q9BXY8 128 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
SMG8-202ENST00000543872 PRRG3Q9BZD7 231 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 RIBC2Q9H4K1 309 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PCNTO95613 3336 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 ASPDHA6ND91 283 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 BCKDKO14874 412 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 TFECO14948 347 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 ANXA6P08133 673 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 MYL3P08590 195 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 SLC26A2P50443 739 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 POU4F1Q01851 419 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 YWHAHQ04917 246 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 ZNF181Q2M3W8 571 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 OR6F1Q8NGZ6 308 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 TUBB1Q9H4B7 451 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 KAT8Q9H7Z6 458 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 CARS2Q9HA77 564 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 SEMA4BQ9NPR2 832 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 HOXC10Q9NYD6 342 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 ZMAT5Q9UDW3 170 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 AGAP5A6NIR3 686 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 MEN1O00255 615 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 ATICP31939 592 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 MASP1P48740 699 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 RABGGTBP53611 331 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 EEFSECP57772 596 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 SLC10A6Q3KNW5 377 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 SYPL2Q5VXT5 272 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 PTRH1Q86Y79 214 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 OR8H2Q8N162 312 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 PABPC5Q96DU9 382 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 RASSF1Q9NS23 344 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 ORC6Q9Y5N6 252 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 MATKP42679 507 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 DEFA1P59665 94 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 DEFA3P59666 94 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 CDK10Q15131 360 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 TRIM71Q2Q1W2 868 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 VARS2Q5ST30 1063 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 KIAA1217Q5T5P2 1943 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 RUBCNLQ9H714 662 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 SCN3BQ9NY72 215 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 CRYL1Q9Y2S2 319 aa12.54□□□□□ -0.4
SMG8-202ENST00000543872 WBP11Q9Y2W2 641 aaKnown RBP12.54□□□□□ -0.4
SMG8-202ENST00000543872 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 A0A1B0GTL3 188 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 SAGE2PA6NJ88 616 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ERI2A8K979 691 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 H3BUI4 141 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 NDST3O95803 873 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 CAPN1P07384 714 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
SMG8-202ENST00000543872 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
SMG8-202ENST00000543872 STK11Q15831 433 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms