RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PWP1Q13610 501 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 FGL2Q14314 439 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 NOMO1Q15155 1222 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 SLC9A3R2Q15599 337 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 TCEAL6Q6IPX3 200 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ZFP1Q6P2D0 407 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 PTCHD4Q6ZW05 846 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 VSIG10LQ86VR7 867 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 KAT2AQ92830 837 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 ELMO3Q96BJ8 720 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 DCAF5Q96JK2 942 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 PSMB7Q99436 277 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 BTBD10Q9BSF8 475 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 REXO4Q9GZR2 422 aaKnown RBP8.82□□□□□ -1
VPS13D-212ENST00000543766 BTBD1Q9H0C5 482 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CREBZFQ9NS37 354 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 SDHAF2Q9NX18 166 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 NDUFAF4Q9P032 175 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 WHRNQ9P202 907 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 DLEC1Q9Y238 1755 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 CCDC88AQ3V6T2 1871 aa8.82□□□□□ -1
VPS13D-212ENST00000543766 H7BY64 318 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 SLC31A2O15432 143 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GPAA1O43292 621 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ADAP1O75689 374 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ITGA6P23229 1130 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 EEF1DP29692 281 aaKnown RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 SLC11A1P49279 550 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GNA12Q03113 381 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FOXO1Q12778 655 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TRAM1Q15629 374 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TSTQ16762 297 aaKnown RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 TRIM60Q495X7 471 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 HEPHL1Q6MZM0 1159 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 DPY19L2P1Q6NXN4 242 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ZNF790Q6PG37 636 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FAM217AQ8IXS0 508 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ZBTB34Q8NCN2 500 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 OR4A15Q8NGL6 344 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ADAMTS18Q8TE60 1221 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 BTBD9Q96Q07 612 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 VAT1Q99536 393 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 RTKNQ9BST9 563 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 BAIAP2Q9UQB8 552 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 NAALADL1Q9UQQ1 740 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 DMRT1Q9Y5R6 373 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 CLCA3PQ9Y6N3 262 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 BTNL10A8MVZ5 291 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 KPNA7A9QM74 516 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 LGI1O95970 557 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 OXTRP30559 389 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 LRRC14Q15048 493 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 SLC36A3Q495N2 470 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 EARS2Q5JPH6 523 aaKnown RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 DCUN1D2Q6PH85 259 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 C6orf15Q6UXA7 325 aaPredicted RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 ETV3LQ6ZN32 361 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 IQCHQ86VS3 1027 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 NLGN4XQ8N0W4 816 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FAM156AQ8NDB6 213 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 YIPF5Q969M3 257 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 DPEP2Q9H4A9 486 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 PCDH9Q9HC56 1237 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 RBAKQ9NYW8 714 aaPredicted RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 COPZ2Q9P299 210 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 PCDHA10Q9Y5I2 948 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 MROH5Q6ZUA9 1318 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 XKRY2A2RUG3 117 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FAM196BA6NMK8 535 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 MINDY4BA8MYZ0 360 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 UBE2Q2LH0YL09 131 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GRM8O00222 908 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FRS3O43559 492 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 PCDHGA12O60330 932 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TBC1D4O60343 1298 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 RNASEH1O60930 286 aaKnown RBP8.81□□□□□ -1
VPS13D-212ENST00000543766 GNSP15586 552 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TIMP2P16035 220 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 EPHB2P29323 1055 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FMO4P31512 558 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 AFMP43652 599 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 PREPP48147 710 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 RHDQ02161 417 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GPS1Q13098 491 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 BFSP2Q13515 415 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GRM2Q14416 872 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 FAM187BQ17R55 369 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TBCELQ5QJ74 424 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 MFSD5Q6N075 450 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 RASGEF1CQ8N431 466 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 ZNF561Q8N587 486 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 MTBPQ96DY7 904 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 CCDC90BQ9GZT6 254 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 TMEM117Q9H0C3 514 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 PPA2Q9H2U2 334 aa8.81□□□□□ -1
VPS13D-212ENST00000543766 GLTPQ9NZD2 209 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms