RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ARFGAP2Q8N6H7 521 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 TMEM105Q8N8V8 129 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 DTWD2Q8NBA8 298 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 SIDT2Q8NBJ9 832 aaKnown RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 CADM4Q8NFZ8 388 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 FAM76AQ8TAV0 307 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 FOXJ1Q92949 421 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 FUBP1Q96AE4 644 aaKnown RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 ZNF514Q96K75 400 aaPredicted RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 LGR4Q9BXB1 951 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 EPHX3Q9H6B9 360 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 SYTL2Q9HCH5 934 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 SPATS2LQ9NUQ6 558 aaKnown RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 MKS1Q9NXB0 559 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 NKIRAS1Q9NYS0 192 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 ATXN10Q9UBB4 475 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 DCDC2Q9UHG0 476 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 MBD1Q9UIS9 605 aaPredicted RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 MED16Q9Y2X0 877 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.53□□□□□ -0.72
DDB1-221ENST00000543162 TMEM98Q9Y2Y6 226 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 DHRS7Q9Y394 339 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 PIKFYVEQ9Y2I7 2098 aa10.53□□□□□ -0.72
DDB1-221ENST00000543162 PLXND1Q9Y4D7 1925 aa10.52□□□□□ -0.72
DDB1-221ENST00000543162 ZDBF2Q9HCK1 2354 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 BPTFQ12830 3046 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 A0A1W2PPC4 97 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 POM121BA6NF01 834 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 METTL12A8MUP2 240 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 MEI4A8MW99 385 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 KPNA5O15131 536 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 SGTAO43765 313 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 TYROBPO43914 113 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 MAGEC1O60732 1142 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 DNAJC6O75061 913 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 GLRA3O75311 464 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 GSTA1P08263 222 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 HOXC4P09017 264 aaPredicted RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 CCDC166P0CW27 439 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 ZNF8P17098 575 aaPredicted RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 RPA3P35244 121 aaPredicted RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 GMPRP36959 345 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 SLC26A3P40879 764 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 PRLHRP49683 370 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CLCN7P51798 805 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CTSCP53634 463 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 IRF9Q00978 393 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CSTF1Q05048 431 aaKnown RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 INSCQ1MX18 579 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 TTLL9Q3SXZ7 439 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 BCL7AQ4VC05 210 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 TMEM220Q6QAJ8 160 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 PAQR3Q6TCH7 311 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 GCNT7Q6ZNI0 430 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 OTOAQ7RTW8 1153 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 BMP8AQ7Z5Y6 402 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CLEC14AQ86T13 490 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 LCA5Q86VQ0 697 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 WDR5BQ86VZ2 330 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 TRAPPC5Q8IUR0 188 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 FBXL6Q8N531 539 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 ZBTB2Q8N680 514 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 DEFB119Q8N690 84 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 ANKRD42Q8N9B4 389 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 TMEM145Q8NBT3 493 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 LKAAEAR1Q8TD35 194 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CD200R1Q8TD46 325 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 KCTD4Q8WVF5 259 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 INPP5DQ92835 1189 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 BMFQ96LC9 184 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 FAM126AQ9BYI3 521 aaPredicted RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.73
DDB1-221ENST00000543162 EBF2Q9HAK2 575 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 OGFRQ9NZT2 677 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 KLHL42Q9P2K6 505 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 GALPQ9UBC7 116 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 CA5BQ9Y2D0 317 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 HS3ST3A1Q9Y663 406 aa10.52□□□□□ -0.73
DDB1-221ENST00000543162 A6NNZ2 444 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 GPR89AB7ZAQ6 455 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 H0Y8X5 98 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 TOR1BO14657 336 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 POLR3GO15318 223 aaPredicted RBP10.51□□□□□ -0.73
DDB1-221ENST00000543162 TM9SF1O15321 606 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 NUAK1O60285 661 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 KLHL2O95198 593 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 ZWINTO95229 277 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 WISP3O95389 354 aaPredicted RBP10.51□□□□□ -0.73
DDB1-221ENST00000543162 TOP3BO95985 862 aaKnown RBP10.51□□□□□ -0.73
DDB1-221ENST00000543162 LTA4HP09960 611 aaKnown RBP10.51□□□□□ -0.73
DDB1-221ENST00000543162 GPR89BP0CG08 455 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 TDGF1P13385 188 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 ZNF37AP17032 561 aaPredicted RBP10.51□□□□□ -0.73
DDB1-221ENST00000543162 BCKDHBP21953 392 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 KELP23276 732 aa10.51□□□□□ -0.73
DDB1-221ENST00000543162 CD27P26842 260 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms