RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CCDC187A0A096LP49 1063 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 LY6G6EA0A0G2JKS1 128 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 TCRBV5S1A1TA0A578 114 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 FAM92AA1XBS5 289 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 FAM90A10PA6NDY2 464 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 GOLGA6L3A6NEY3 463 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 POM121BA6NF01 834 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 O00370 1275 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 DSCR3O14972 297 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 THAP12O43422 761 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 NOL4O94818 638 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 UNC5CO95185 931 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 IPO7O95373 1038 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 RALAP11233 206 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 GZMAP12544 262 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 CYP11B1P15538 503 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 EPCAMP16422 314 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 KCNA5P22460 613 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 TNFSF4P23510 183 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 BDNFP23560 247 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ACAT1P24752 427 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 CYP2F1P24903 491 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 YWHAQP27348 245 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 HNRNPH3P31942 346 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 PRKCIP41743 596 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 KCNJ5P48544 419 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 GSDMDP57764 484 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 CDR2Q01850 454 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 TWF1Q12792 350 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 DAG1Q14118 895 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ZNF268Q14587 947 aaPredicted RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 RBMS2Q15434 407 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 C3orf38Q5JPI3 329 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 C10orf76Q5T2E6 689 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 C10orf25Q5T742 122 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SNX30Q5VWJ9 437 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SPOPLQ6IQ16 392 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 C1orf228Q6PIY5 440 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ZNF783Q6ZMS7 281 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ARCQ7LC44 396 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 APTXQ7Z2E3 356 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 CCDC186Q7Z3E2 898 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ADGRD2Q7Z7M1 963 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SCN4BQ8IWT1 228 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SIX6OS1Q8N1H7 587 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ATAD1Q8NBU5 361 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 OR8K1Q8NGG5 319 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SLC2A14Q8TDB8 520 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 IPO4Q8TEX9 1081 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 ZNF606Q8WXB4 792 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SUSD6Q92537 303 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 MYLPFQ96A32 169 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 NMD3Q96D46 503 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 B3GALT6Q96L58 329 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 TTLL2Q9BWV7 592 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 PHF7Q9BWX1 381 aaPredicted RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 XPO4Q9C0E2 1151 aaKnown RBP4.55□□□□□ -1.68
MDM2-228ENST00000542502 GANQ9H2C0 597 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SYNCQ9H7C4 482 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 KIF9Q9HAQ2 790 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 LRRC4Q9HBW1 653 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 CNGB3Q9NQW8 809 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 CLIC5Q9NZA1 410 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 IL37Q9NZH6 218 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 IGSF9Q9P2J2 1179 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 CACNG4Q9UBN1 327 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 TSPAN16Q9UKR8 245 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 SCML2Q9UQR0 700 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 PLXNA3P51805 1871 aa4.55□□□□□ -1.68
MDM2-228ENST00000542502 ZNF638Q14966 1978 aaKnown RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 GREB1Q4ZG55 1949 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 TRAV19A0A0A6YYK7 116 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 AKR1B15C9JRZ8 316 aaPredicted RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 F8VP50 259 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 BTN3A1O00481 513 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 SLC9A3R1O14745 358 aaPredicted RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 ADAM12O43184 909 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 MBTPS2O43462 519 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 ATP2C2O75185 946 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 SEC24AO95486 1093 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 GLP2RO95838 553 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 F9P00740 461 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 SERPING1P05155 500 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 CALB1P05937 261 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 GRPP07492 148 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 MYBL1P10243 752 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 SLC2A3P11169 496 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 PRF1P14222 555 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 TNFAIP3P21580 790 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 CDH5P33151 784 aaPredicted RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 AVPR1AP37288 418 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 PBX1P40424 430 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 NSFP46459 744 aaKnown RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 STT3AP46977 705 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 RPL34P49207 117 aaKnown RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 MAP3K7CLP57077 242 aa4.54□□□□□ -1.68
MDM2-228ENST00000542502 RPS16P62249 146 aaKnown RBP4.54□□□□□ -1.68
MDM2-228ENST00000542502 COG7P83436 770 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms