RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KLHDC9Q8NEP7 349 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TNIP2Q8NFZ5 429 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 OR13C4Q8NGS5 318 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM81AQ8TBF8 368 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 BLOC1S5Q8TDH9 187 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 GAB3Q8WWW8 586 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FUBP1Q96AE4 644 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ISG20Q96AZ6 181 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 PPWD1Q96BP3 646 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 NSMCE3Q96MG7 304 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 MGME1Q9BQP7 344 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 C9orf16Q9BUW7 83 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ADI1Q9BV57 179 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CAAP1Q9H8G2 361 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CD320Q9NPF0 282 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 SMOXQ9NWM0 555 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 COMMD8Q9NX08 183 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CIDEBQ9UHD4 219 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF225Q9UK10 706 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CDH7Q9ULB5 785 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 PCDHB5Q9Y5E4 795 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 SPO11Q9Y5K1 396 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ST14Q9Y5Y6 855 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 KANSL1LA0AUZ9 987 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CCDC160A6NGH7 325 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 MANSC4A6NHS7 340 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SAC3D1A6NKF1 404 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SYCE1LA8MT33 242 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 EIF1AYO14602 144 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SYN3O14994 580 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RHOBTB1O94844 696 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 VNN2O95498 520 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 EOMESO95936 686 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 ADH1CP00326 375 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PRLP01236 227 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CYBBP04839 570 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SERPINF2P08697 491 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 GNAO1P09471 354 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 LINC00032P0C843 101 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PRSS56P0CW18 603 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 UROSP10746 265 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 NELFEP18615 380 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 UGT1A6P19224 532 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CHRM3P20309 590 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TACR2P21452 398 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PSMA4P25789 261 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 HTR1EP28566 365 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CTGFP29279 349 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 OXTRP30559 389 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 OR1E1P30953 314 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 GRK4P32298 578 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RFC2P35250 354 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 ETFBP38117 255 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DIO3P55073 304 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 KCNC4Q03721 635 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RAD51Q06609 339 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CACNB2Q08289 660 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 GALNT3Q14435 633 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CAPRIN1Q14444 709 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 ZNF235Q14590 738 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TAF1CQ15572 869 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TAF1AQ15573 450 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TSNQ15631 228 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 ZBED5Q49AG3 693 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 LRRC23Q53EV4 343 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PAGE3Q5JUK9 113 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CLLU1OSQ5K130 101 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TMTC4Q5T4D3 741 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TXNDC11Q6PKC3 985 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 AFTPHQ6ULP2 937 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PRR23BQ6ZRT6 265 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 USP51Q70EK9 711 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SYVN1Q86TM6 617 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RTN4RL1Q86UN2 441 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 CIR1Q86X95 450 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DDIASQ8IXT1 998 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 KIAA2013Q8IYS2 634 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TBC1D21Q8IYX1 336 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RYBPQ8N488 228 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TMEM199Q8N511 208 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 NKAPQ8N5F7 415 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DPP10Q8N608 796 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 KDF1Q8NAX2 398 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DIS3LQ8TF46 1054 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SEPT8Q92599 483 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 EXT2Q93063 718 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TUBGCP3Q96CW5 907 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 SPATA17Q96L03 361 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 TEX37Q96LM6 180 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 RPRD1AQ96P16 312 aaPredicted RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 PSKH2Q96QS6 385 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DOK1Q99704 481 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 YTHDF1Q9BYJ9 559 aaKnown RBP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 MUC3BQ9H195 1237 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 MAGEH1Q9H213 219 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 IL1RL2Q9HB29 575 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 ZFYVE28Q9HCC9 887 aa5.14□□□□□ -1.59
ATPAF1-212ENST00000542495 DDX18Q9NVP1 670 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms