RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CCDC170Q8IYT3 715 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 GUF1Q8N442 669 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 IQUBQ8NA54 791 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 HJURPQ8NCD3 748 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CDRT15Q96T59 188 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 GPATCH1Q9BRR8 931 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 NAA11Q9BSU3 229 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 C1QTNF5Q9BXJ0 243 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TKTL2Q9H0I9 626 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 MMP27Q9H306 513 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 COPS7BQ9H9Q2 264 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CHMP1AQ9HD42 196 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 PNRC2Q9NPJ4 139 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 THSD1Q9NS62 852 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ANKRD10Q9NXR5 420 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 CISD1Q9NZ45 108 aaKnown RBP4.23□□□□□ -1.73
SNHG1-217ENST00000541578 STK26Q9P289 416 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 TUBE1Q9UJT0 475 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 OSGIN1Q9UJX0 560 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 FBXW11Q9UKB1 542 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 PLAGL1Q9UM63 463 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 ARHGEF10O15013 1369 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 GLI3P10071 1580 aa4.23□□□□□ -1.73
SNHG1-217ENST00000541578 PTPRUQ92729 1446 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 IQGAP3Q86VI3 1631 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 XRN1Q8IZH2 1706 aaKnown RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 GPR75-ASB3A0A0A6YYF3 556 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 TMEM272A0A1B0GTI8 110 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 EDDM13A0A1B0GTR0 161 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 A0A1W2PPC1 479 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PAPSS1O43252 624 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 EPN2O95208 641 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 TRUB2O95900 331 aaKnown RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 FTCDO95954 541 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 BCL10O95999 233 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 FGF2P09038 288 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 MYZAPP0CAP1 466 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 MC5RP33032 325 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 AMPHP49418 695 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 CAPZA1P52907 286 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 UBXN1Q04323 297 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PPP2R5CQ13362 524 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 INPP5JQ15735 1006 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PNLIPRP3Q17RR3 467 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 SMTNL2Q2TAL5 461 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PRTGQ2VWP7 1150 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 CDONQ4KMG0 1287 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DCAF6Q58WW2 860 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 LRIF1Q5T3J3 769 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 C6orf163Q5TEZ5 329 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 PMS2CLQ68D20 193 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DCLRE1AQ6PJP8 1040 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 CLEC17AQ6ZS10 378 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 ERN2Q76MJ5 926 aaKnown RBP4.22□□□□□ -1.73
SNHG1-217ENST00000541578 LINGO2Q7L985 606 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 TRIM74Q86UV6 250 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 TRIM73Q86UV7 250 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 ZSCAN30Q86W11 494 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 SLC35F3Q8IY50 421 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 TC2NQ8N9U0 490 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 MGARPQ8TDB4 240 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 ERLEC1Q96DZ1 483 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 FER1L6-AS2Q96M78 137 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DESI2Q9BSY9 194 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 NUP85Q9BW27 656 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DNAI2Q9GZS0 605 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 ANKRD2Q9GZV1 360 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 DBNDD1Q9H9R9 158 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 FZD3Q9NPG1 666 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 MYOM2P54296 1465 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 ADGRB2O60241 1585 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 CROCC2H7BZ55 1655 aa4.22□□□□□ -1.73
SNHG1-217ENST00000541578 CCDC144AA2RUR9 1427 aa4.21□□□□□ -1.73
SNHG1-217ENST00000541578 ABCC5O15440 1437 aa4.21□□□□□ -1.73
SNHG1-217ENST00000541578 TTC3P53804 2025 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 LOC102723996A0A087X1L8 192 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TRBV5-7A0A0A0MS05 114 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 A0A0U1RQF3 1178 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 LNP1A1A4G5 178 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM202A6NGA9 273 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 HSPB6O14558 160 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 VCYO14598 125 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 ATP2A1O14983 1001 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 STX6O43752 255 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 ATG13O75143 517 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 NDUFB4O95168 129 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 AGAP20933 346 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CALRP27797 417 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CHATP28329 748 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CCKARP32238 428 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CCR10P46092 362 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 GPR143P51810 404 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 BMXP51813 675 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CDH12P55289 794 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms