RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 A8MZ25 164 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 SCGB1D1O95968 90 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 ACTN1P12814 892 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 SELLP14151 372 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 NR2F2P24468 414 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 CD81P60033 236 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
YBX3-210ENST00000540975 KIR2DS5Q14953 304 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 MAATS1Q7Z4T9 603 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 TICAM1Q8IUC6 712 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 WDTC1Q8N5D0 677 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 ANKRD52Q8NB46 1076 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 GRAPLQ8TC17 118 aaPredicted RBP5.67□□□□□ -1.5
YBX3-210ENST00000540975 NUDCD1Q96RS6 583 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 GAD1Q99259 594 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 KRT84Q9NSB2 600 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.67□□□□□ -1.5
YBX3-210ENST00000540975 RCC2Q9P258 522 aaKnown RBP5.67□□□□□ -1.5
YBX3-210ENST00000540975 TSPYL4Q9UJ04 414 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 YIPF1Q9Y548 306 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
YBX3-210ENST00000540975 A0A1W2PPI3 338 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 PMS2P5A8MQ11 134 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 J3QR06 171 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 HS6ST1O60243 411 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 TMCC2O75069 709 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 SPOCK1Q08629 439 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 MVPQ14764 893 aaKnown RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 CRYMQ14894 314 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 KIR2DS3Q14952 304 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 ASTE1Q2TB18 679 aaPredicted RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 RARS2Q5T160 578 aaKnown RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 CCDC30Q5VVM6 783 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 TPRG1Q6ZUI0 275 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 RSRC2Q7L4I2 434 aaKnown RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 TMTC2Q8N394 836 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 TEX19Q8NA77 164 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 SCFD2Q8WU76 684 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 ZNF524Q96C55 264 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 ZNF501Q96CX3 271 aaPredicted RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 STAMBPL1Q96FJ0 436 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 OXNAD1Q96HP4 312 aaPredicted RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 C17orf77Q96MU5 243 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 PLK3Q9H4B4 646 aa5.66□□□□□ -1.5
YBX3-210ENST00000540975 SEPT11Q9NVA2 429 aaKnown RBP5.66□□□□□ -1.5
YBX3-210ENST00000540975 ZBTB43O43298 467 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 PDE9AO76083 593 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 BMP10O95393 424 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 ACADMP11310 421 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 HOXA13P31271 388 aaPredicted RBP5.65□□□□□ -1.5
YBX3-210ENST00000540975 CAMPP49913 170 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 DCAF7P61962 342 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 IKQ13123 557 aaPredicted RBP5.65□□□□□ -1.5
YBX3-210ENST00000540975 KIAA0930Q6ICG6 404 aaPredicted RBP5.65□□□□□ -1.5
YBX3-210ENST00000540975 ADAM5Q6NVV9 412 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 TMEM154Q6P9G4 183 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 ZNF534Q76KX8 674 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 DGLUCYQ7Z3D6 616 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
YBX3-210ENST00000540975 PPP4R1Q8TF05 950 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 ZNF354BQ96LW1 612 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 NAP1L4Q99733 375 aaKnown RBP5.65□□□□□ -1.5
YBX3-210ENST00000540975 CHMP4AQ9BY43 222 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 FBXL17Q9UF56 701 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 CMAHPQ9Y471 501 aa5.65□□□□□ -1.5
YBX3-210ENST00000540975 KIF26BQ2KJY2 2108 aa5.65□□□□□ -1.51
YBX3-210ENST00000540975 TMEM8BA6NDV4 472 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 H0YIN7 160 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 TMEM189-UBE2V1I3L0A0 370 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 SRPRAP08240 638 aaKnown RBP5.64□□□□□ -1.51
YBX3-210ENST00000540975 KRT19P08727 400 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 MCCP23508 829 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 CDH8P55286 799 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 UBE2V1Q13404 147 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 MEP1AQ16819 746 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 DUOXA1Q1HG43 343 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 WDR38Q5JTN6 314 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 CEACAM20Q6UY09 585 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 PACS1Q6VY07 963 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 CHST9Q7L1S5 443 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 TBC1D1Q86TI0 1168 aaPredicted RBP5.64□□□□□ -1.51
YBX3-210ENST00000540975 LONP2Q86WA8 852 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 TEX11Q8IYF3 940 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 PGAM5Q96HS1 289 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 F2RL3Q96RI0 385 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 SLX1AQ9BQ83 275 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 RAD21L1Q9H4I0 556 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 SCRT2Q9NQ03 307 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 OGFRQ9NZT2 677 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 KIAA1210Q9ULL0 1709 aa5.64□□□□□ -1.51
YBX3-210ENST00000540975 OR2M5A3KFT3 312 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 C15orf62A8K5M9 175 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 LIPFP07098 398 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 GABRB1P18505 474 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 TM4SF1P30408 202 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 MBTD1Q05BQ5 628 aa5.63□□□□□ -1.51
YBX3-210ENST00000540975 TECRLQ5HYJ1 363 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms