RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 MAP7D3Q8IWC1 876 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 RNF31Q96EP0 1072 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 VPS35Q96QK1 796 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 THAP2Q9H0W7 228 aa26.3■■□□□ 1.8
CHFR-218ENST00000540963 CDK14O94921 469 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 RPL10P27635 214 aaKnown RBP26.29■■□□□ 1.8
CHFR-218ENST00000540963 IQCB1Q15051 598 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 PLA2G4EQ3MJ16 856 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 FILIP1LQ4L180 1135 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 ALS2CLQ60I27 953 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 HIST2H2BCQ6DN03 193 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 HPS6Q86YV9 775 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 FAF2Q96CS3 445 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 BTBD6Q96KE9 485 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 TRIB3Q96RU7 358 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 SRPK1Q96SB4 655 aaKnown RBP26.29■■□□□ 1.8
CHFR-218ENST00000540963 DTLQ9NZJ0 730 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 BZW2Q9Y6E2 419 aaKnown RBP26.29■■□□□ 1.8
CHFR-218ENST00000540963 PRRC2CQ9Y520 2896 aaKnown RBP26.29■■□□□ 1.8
CHFR-218ENST00000540963 CREBBPQ92793 2442 aa26.29■■□□□ 1.8
CHFR-218ENST00000540963 OR52A4PA6NMU1 304 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 JCHAINP01591 159 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 CYP1A2P05177 515 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 SKILP12757 684 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 FOLR1P15328 257 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 FECHP22830 423 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 HALP42357 657 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 IFI35P80217 286 aaPredicted RBP26.28■■□□□ 1.8
CHFR-218ENST00000540963 PDE1BQ01064 536 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 LAMB3Q13751 1172 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 KCTD6Q8NC69 237 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 CD180Q99467 661 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 ACSS2Q9NR19 701 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 ZNF451Q9Y4E5 1061 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 ITPR2Q14571 2701 aa26.28■■□□□ 1.8
CHFR-218ENST00000540963 IGHV5-51A0A0C4DH38 117 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 LPOP22079 712 aaPredicted RBP26.27■■□□□ 1.8
CHFR-218ENST00000540963 SSR1P43307 286 aaKnown RBP26.27■■□□□ 1.8
CHFR-218ENST00000540963 GBE1Q04446 702 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 GALNT3Q14435 633 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 NADK2Q4G0N4 442 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 ZNF517Q6ZMY9 492 aaPredicted RBP26.27■■□□□ 1.8
CHFR-218ENST00000540963 C11orf96Q7Z7L8 435 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 CNTD1Q8N815 330 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 CCNYQ8ND76 341 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 ZNF514Q96K75 400 aaPredicted RBP26.27■■□□□ 1.8
CHFR-218ENST00000540963 ING2Q9H160 280 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 FGF21Q9NSA1 209 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 FARSAQ9Y285 508 aaKnown RBP26.27■■□□□ 1.8
CHFR-218ENST00000540963 ZNF711Q9Y462 761 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 CACNA1DQ01668 2161 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 HIVEP3Q5T1R4 2406 aa26.27■■□□□ 1.8
CHFR-218ENST00000540963 ENO4A6NNW6 628 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 SEMA7AO75326 666 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 PPIDQ08752 370 aaKnown RBP26.26■■□□□ 1.79
CHFR-218ENST00000540963 SLC10A2Q12908 348 aaPredicted RBP26.26■■□□□ 1.79
CHFR-218ENST00000540963 CHRNA6Q15825 494 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 SLC14A2Q15849 920 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 FIGNQ5HY92 759 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 CAVIN1Q6NZI2 390 aaKnown RBP26.26■■□□□ 1.79
CHFR-218ENST00000540963 OR8K5Q8NH50 307 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 BRSK1Q8TDC3 778 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 ZNF830Q96NB3 372 aaPredicted RBP26.26■■□□□ 1.79
CHFR-218ENST00000540963 GPR63Q9BZJ6 419 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 SHOC2Q9UQ13 582 aa26.26■■□□□ 1.79
CHFR-218ENST00000540963 A0A1B0GTH6 734 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 CPNE3O75131 537 aaKnown RBP26.25■■□□□ 1.79
CHFR-218ENST00000540963 CEACAM4O75871 244 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 BPIP17213 487 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 DRG2P55039 364 aaKnown RBP26.25■■□□□ 1.79
CHFR-218ENST00000540963 DMPKQ09013 629 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 IZUMO3Q5VZ72 239 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 CARFQ8N187 725 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 PQLC3Q8N755 202 aa26.25■■□□□ 1.79
CHFR-218ENST00000540963 IMP4Q96G21 291 aaKnown RBP26.25■■□□□ 1.79
CHFR-218ENST00000540963 NAT10Q9H0A0 1025 aaKnown RBP26.25■■□□□ 1.79
CHFR-218ENST00000540963 AKIRIN1Q9H9L7 192 aaPredicted RBP26.25■■□□□ 1.79
CHFR-218ENST00000540963 TLCD2A6NGC4 264 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 KCNK1O00180 336 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 DPM1O60762 260 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 MTX2O75431 263 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 CCL11P51671 97 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 HSD11B2P80365 405 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 TMEM115Q12893 351 aaPredicted RBP26.24■■□□□ 1.79
CHFR-218ENST00000540963 GTF2H3Q13889 308 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 INPP5JQ15735 1006 aaPredicted RBP26.24■■□□□ 1.79
CHFR-218ENST00000540963 ATP13A4Q4VNC1 1196 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 KHDC1Q4VXA5 237 aaKnown RBP26.24■■□□□ 1.79
CHFR-218ENST00000540963 CPZQ66K79 652 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 HGSNATQ68CP4 663 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 FAM199XQ6PEV8 388 aaPredicted RBP26.24■■□□□ 1.79
CHFR-218ENST00000540963 D2HGDHQ8N465 521 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 DTX3LQ8TDB6 740 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 LRFN5Q96NI6 719 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 RUFY1Q96T51 708 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 SLC29A3Q9BZD2 475 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 LATS2Q9NRM7 1088 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 G3BP2Q9UN86 482 aaKnown RBP26.24■■□□□ 1.79
CHFR-218ENST00000540963 WDR37Q9Y2I8 494 aa26.24■■□□□ 1.79
CHFR-218ENST00000540963 ARGFXA6NJG6 315 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms