RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 IHHQ14623 411 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 PTPRRQ15256 657 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 GPR33Q49SQ1 333 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 ANKRD20A2Q5SQ80 823 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 ANKRD20A1Q5TYW2 823 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 ANKRD20A3Q5VUR7 823 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 TMEM26Q6ZUK4 368 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 CARFQ8N187 725 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 SLC25A41Q8N5S1 370 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 ACTL9Q8TC94 416 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 LRRN4Q8WUT4 740 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 NCSTNQ92542 709 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 SPATA13Q96N96 652 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 CATSPER2Q96P56 530 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 NUDT22Q9BRQ3 303 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 CCM2Q9BSQ5 444 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 RAB33BQ9H082 229 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 CAAP1Q9H8G2 361 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 CPNE5Q9HCH3 593 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 IL26Q9NPH9 171 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 UBP1Q9NZI7 540 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
CDCA3-208ENST00000540683 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 COLEC10Q9Y6Z7 277 aa10.23□□□□□ -0.77
CDCA3-208ENST00000540683 KIF26BQ2KJY2 2108 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 A6NCN8 305 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 MATN2O00339 956 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 POLR1CO15160 346 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 KDM1AO60341 852 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 PRAMEF1O95521 474 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 MT-ND3P03897 115 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 PIRTP0C851 137 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 RBL1P28749 1068 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 CD68P34810 354 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 MAPK9P45984 424 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 UBE2IP63279 158 aaKnown RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 CFHR1Q03591 330 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 MAP7Q14244 749 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 IL11RAQ14626 422 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 C16orf72Q14CZ0 275 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 PARP6Q2NL67 630 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 ATP13A5Q4VNC0 1218 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 SEL1L2Q5TEA6 688 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 ARMC6Q6NXE6 501 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 CRTC3Q6UUV7 619 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 FAM151BQ6UXP7 276 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 RANBP10Q6VN20 620 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 ZNF398Q8TD17 642 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 PATE1Q8WXA2 126 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 SEC14L1Q92503 715 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 UBXN4Q92575 508 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 KRT35Q92764 455 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 CD180Q99467 661 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 FICDQ9BVA6 458 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 ARNT2Q9HBZ2 717 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 BPIFA1Q9NP55 256 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 EPHA6Q9UF33 1036 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 CRLS1Q9UJA2 301 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 RALYQ9UKM9 306 aaKnown RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 SLC30A1Q9Y6M5 507 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 SCN8AQ9UQD0 1980 aa10.22□□□□□ -0.77
CDCA3-208ENST00000540683 MN1Q10571 1320 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-208ENST00000540683 AHCTF1Q8WYP5 2266 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 TRBV23OR9-2A0A075B6M9 112 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 A0A0U1RQS6 177 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 A0A1W2PNU3 283 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 EFCAB7A8K855 629 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 AP3B1O00203 1094 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 SRP72O76094 671 aaKnown RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 SLC35G4P0C7Q5 338 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 HGFP14210 728 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ITIH1P19827 911 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 CAPZBP47756 277 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ARL4DP49703 201 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 MC2RQ01718 297 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 KRT33BQ14525 404 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 NKAIN2Q5VXU1 208 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 C4orf22Q6V702 233 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ZNF574Q6ZN55 896 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ARHGAP22Q7Z5H3 698 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ZNF605Q86T29 641 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 DTX1Q86Y01 620 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 KMT5CQ86Y97 462 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 CACNA2D3Q8IZS8 1091 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 NLGN4XQ8N0W4 816 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 TTC30BQ8N4P2 665 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 RCBTB1Q8NDN9 531 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 NLGN4YQ8NFZ3 816 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 MAIP1Q8WWC4 291 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ART4Q93070 314 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 EID2BQ96D98 161 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 MED8Q96G25 268 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 OXNAD1Q96HP4 312 aaPredicted RBP10.21□□□□□ -0.77
CDCA3-208ENST00000540683 FCRL4Q96PJ5 515 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms