RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 APRTP07741 180 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CCKBRP32239 447 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ACTN2P35609 894 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 HADHAP40939 763 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 SLC19A1P41440 591 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 GPR3P46089 330 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 LMAN1P49257 510 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 UBE2IP63279 158 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CDH17Q12864 832 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 TBC1D25Q3MII6 688 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 FNBP1LQ5T0N5 605 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 SNX20Q7Z614 316 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 LINC00523Q86TU6 105 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 NXPE1Q8N323 547 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 DNAAF3Q8N9W5 541 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 STYXQ8WUJ0 223 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 LIN37Q96GY3 246 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CDKN2AIPNLQ96HQ2 116 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF778Q96MU6 729 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 AP1M1Q9BXS5 423 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 ZCCHC2Q9C0B9 1178 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 SARS2Q9NP81 518 aaKnown RBP14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CASS4Q9NQ75 786 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 KCNK4Q9NYG8 393 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CPNE7Q9UBL6 633 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 SLC2A6Q9UGQ3 507 aa14.82□□□□□ -0.04
UBE3B-212ENST00000540230 CCDC187A0A096LP49 1063 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 TRBV5-4A0A0C4DH59 114 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 KIR2DS5A0A0G2JLQ3 304 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 A0A0G2JNG1 304 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 OR52A4PA6NMU1 304 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 KIR2DS3K7RE56 304 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 DXOO77932 396 aaKnown RBP14.81□□□□□ -0.04
UBE3B-212ENST00000540230 MSH3P20585 1137 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 ITGALP20701 1170 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 MPSTP25325 297 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 NFE2L1Q14494 772 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 KIR2DS5Q14953 304 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 CLCA4Q14CN2 919 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 TRIP13Q15645 432 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-212ENST00000540230 PPP1R21Q6ZMI0 780 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 GSTA5Q7RTV2 222 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 PIM3Q86V86 326 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 PIANPQ8IYJ0 282 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 RCBTB1Q8NDN9 531 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 OR13J1Q8NGT2 312 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 WDR36Q8NI36 951 aaKnown RBP14.81□□□□□ -0.04
UBE3B-212ENST00000540230 GRAMD1AQ96CP6 724 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 PBKQ96KB5 322 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 TMEM74Q96NL1 305 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 DCBLD2Q96PD2 775 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 OSBPL9Q96SU4 736 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 SLC38A3Q99624 504 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 C19orf43Q9BQ61 176 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 TBC1D10AQ9BXI6 508 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 SLC30A1Q9Y6M5 507 aa14.81□□□□□ -0.04
UBE3B-212ENST00000540230 LOC400499M0QZD8 3231 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 IGHV5-10-1A0A0J9YXX1 117 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 TCRBV7S3A2A0A539 114 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF185O15231 689 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 ITIH1P19827 911 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 PSMA3P25788 255 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 TERF1P54274 439 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 BASP1P80723 227 aaKnown RBP14.8□□□□□ -0.04
UBE3B-212ENST00000540230 DMPKQ09013 629 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 C16orf72Q14CZ0 275 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 ZRANB3Q5FWF4 1079 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 PHF19Q5T6S3 580 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 ABRAXAS1Q6UWZ7 409 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 RAB11FIP2Q7L804 512 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 SLC9B2Q86UD5 537 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 AMZ2Q86W34 360 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 SERPINA9Q86WD7 417 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 LILRA3Q8N6C8 439 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-212ENST00000540230 SNIP1Q8TAD8 396 aaKnown RBP14.8□□□□□ -0.04
UBE3B-212ENST00000540230 ANP32BQ92688 251 aaKnown RBP14.8□□□□□ -0.04
UBE3B-212ENST00000540230 FAM8A1Q9UBU6 413 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 TTC7AQ9ULT0 858 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-212ENST00000540230 PSMD13Q9UNM6 376 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 PCDHGA8Q9Y5G5 932 aa14.8□□□□□ -0.04
UBE3B-212ENST00000540230 PIKFYVEQ9Y2I7 2098 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 IGLV3-16A0A075B6K0 115 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 OR5K4A6NMS3 321 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 PLD2O14939 933 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 SLC2A4P14672 509 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 XRCC1P18887 633 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-212ENST00000540230 IDSP22304 550 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 ACRV1P26436 265 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 EIF2S3P41091 472 aaKnown RBP14.79□□□□□ -0.04
UBE3B-212ENST00000540230 ETV5P41161 510 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 VPS41P49754 854 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 C19orf48Q6RUI8 117 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 ZNF534Q76KX8 674 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 GPR150Q8NGU9 434 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 FGF11Q92914 225 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 ULK4Q96C45 1275 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 CCDC74BQ96LY2 380 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 SLC46A1Q96NT5 459 aa14.79□□□□□ -0.04
UBE3B-212ENST00000540230 COPS8Q99627 209 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms