RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CES3Q6UWW8 571 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PACS1Q6VY07 963 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CHST15Q7LFX5 561 aaPredicted RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GLRX5Q86SX6 157 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 TMEM135Q86UB9 458 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 LRRTM4Q86VH4 590 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GKN2Q86XP6 184 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 TRAPPC5Q8IUR0 188 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PDIK1LQ8N165 341 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CEP112Q8N8E3 955 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 RASGEF1AQ8N9B8 481 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 FAM181AQ8N9Y4 354 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 KYQ8NBH2 561 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 BBOF1Q8ND07 529 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 OR4L1Q8NH43 312 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 NAT14Q8WUY8 206 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ART4Q93070 314 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNF669Q96BR6 464 aaPredicted RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 STAMBPL1Q96FJ0 436 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 TTC25Q96NG3 672 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 FCRL3Q96P31 734 aaPredicted RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 COPS8Q99627 209 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 TIMM29Q9BSF4 260 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GSDMCQ9BYG8 508 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC32A1Q9H598 525 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 L2HGDHQ9H9P8 463 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PLAC1Q9HBJ0 212 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ZDHHC3Q9NYG2 299 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 MARCH4Q9P2E8 410 aaPredicted RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 FTSJ1Q9UET6 329 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNHIT2Q9UHR6 403 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GPR34Q9UPC5 381 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 UTP11Q9Y3A2 253 aaKnown RBP6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 GPSM3Q9Y4H4 160 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 MAD1L1Q9Y6D9 718 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 RPS6KL1Q9Y6S9 549 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 U3KQA8 63 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
LPCAT3-209ENST00000540060 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 MAGEB16A2A368 324 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DCDC2BA2VCK2 349 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 A6NCN8 305 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 B4DGG1 531 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 CFAP99D6REC4 459 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 GIPC1O14908 333 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 KMOO15229 486 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 NOBOXO60393 691 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 VAPBO95292 243 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 LDOC1O95751 146 aaPredicted RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 POLBP06746 335 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 RALBP11234 206 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 CKMT1AP12532 417 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNF7P17097 686 aaPredicted RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 PAMP19021 973 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DEKP35659 375 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ACTR1BP42025 376 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 NSG1P42857 185 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ID4P47928 161 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ACADVLP49748 655 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 CLCNKAP51800 687 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DRG2P55039 364 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ARL4CP56559 192 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ACTR1AP61163 376 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DMPKQ09013 629 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 GTF2H3Q13889 308 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 CRYMQ14894 314 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 TRADDQ15628 312 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 TRIP6Q15654 476 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 SMAD1Q15797 465 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 INSCQ1MX18 579 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 TYSND1Q2T9J0 566 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 BBS9Q3SYG4 887 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ANKRD20A4Q4UJ75 823 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 BCL7AQ4VC05 210 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 FASTKD1Q53R41 847 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 AARS2Q5JTZ9 985 aaKnown RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC30A9Q6PML9 568 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 XKR5Q6UX68 686 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ZDHHC24Q6UX98 284 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 DET1Q7L5Y6 550 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 TAS2R42Q7RTR8 314 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 TAF8Q7Z7C8 310 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 IGDCC3Q8IVU1 814 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 SFTPA2Q8IWL1 248 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC35F3Q8IY50 421 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 CLDN19Q8N6F1 224 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 BEND7Q8N7W2 519 aaPredicted RBP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 ARL10Q8N8L6 244 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 PNPLA1Q8N8W4 532 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 LRRN4CLQ8ND94 238 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 GPR156Q8NFN8 814 aa6.87□□□□□ -1.31
LPCAT3-209ENST00000540060 OR6P1Q8NGX9 317 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms