RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 UGT1A4P22310 534 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 UGT1A3P35503 534 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 UGT1A5P35504 534 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 STT3AP46977 705 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 RPS6KA3P51812 740 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 POLR2JP52435 117 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 PLD1Q13393 1074 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 RCAN2Q14206 197 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 PTGR1Q14914 329 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 TAF1AQ15573 450 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 LPCAT2Q7L5N7 544 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CAMK1DQ8IU85 385 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CARNMT1Q8N4J0 409 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 SGCDQ92629 289 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 FATE1Q969F0 183 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 SCLYQ96I15 445 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 RNF145Q96MT1 663 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ANKRD60Q9BZ19 345 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ACTL8Q9H568 366 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 OLA1Q9NTK5 396 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ARMC1Q9NVT9 282 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CNOT11Q9UKZ1 510 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 GBF1Q92538 1859 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 TBKBP1A7MCY6 615 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 STC2O76061 302 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CDK4P11802 303 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 LPOP22079 712 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 HSPA7P48741 367 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CCT8P50990 548 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 LAPTM5Q13571 262 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 MAP7Q14244 749 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ABRAXAS2Q15018 415 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 RFTN2Q52LD8 501 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CXorf57Q6NSI4 855 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 GPRIN3Q6ZVF9 776 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 HS3ST5Q8IZT8 346 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 MTFMTQ96DP5 389 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 NAA50Q9GZZ1 169 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 PNPLA3Q9NST1 481 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 INTS10Q9NVR2 710 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ACTR3BQ9P1U1 418 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 DNMT3LQ9UJW3 386 aa13.9□□□□□ -0.18
UBE3B-210ENST00000539599 ABT1Q9ULW3 272 aaKnown RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 NUP214P35658 2090 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-210ENST00000539599 TCRBV5S2A0A599 114 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 INPPL1O15357 1258 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 KDELR3O43731 214 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 VPS26AO75436 327 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 PENKP01210 267 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-210ENST00000539599 EPOP01588 193 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 FASP25445 335 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 VARSP26640 1264 aaKnown RBP13.89□□□□□ -0.19
UBE3B-210ENST00000539599 FAM189BP81408 668 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 HMGCS1Q01581 520 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 TNK2Q07912 1038 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 MERTKQ12866 999 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 XKR7Q5GH72 579 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 TTC33Q6PID6 262 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-210ENST00000539599 FBXO22Q8NEZ5 403 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 OR4F6Q8NGB9 312 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 B4GALNT2Q8NHY0 566 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 METTL6Q8TCB7 284 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 THEGQ9P2T0 379 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 CHD5Q8TDI0 1954 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 BBIP1A8MTZ0 92 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 MAGEB3O15480 346 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 BNIP3LO60238 219 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 TRMUO75648 421 aaKnown RBP13.89□□□□□ -0.19
UBE3B-210ENST00000539599 MATN4O95460 622 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 C1QCP02747 245 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 PRR35P0CG20 571 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 HSD17B1P14061 328 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 TCF3P15923 654 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZNF23P17027 643 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 IL2P60568 153 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZXDBP98169 803 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 RING1Q06587 406 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 INPP5AQ14642 412 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 CLVS1Q8IUQ0 354 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-210ENST00000539599 PAF1Q8N7H5 531 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZFP14Q9HCL3 533 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ELOVL2Q9NXB9 296 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
UBE3B-210ENST00000539599 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 H0Y626 953 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 SMAD6O43541 496 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms