RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OR6P1Q8NGX9 317 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 CCDC74AQ96AQ1 378 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 TTC25Q96NG3 672 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 COPS8Q99627 209 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 OSGEPL1Q9H4B0 414 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 ZDHHC3Q9NYG2 299 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 SNX24Q9Y343 169 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 PCDHGA1Q9Y5H4 931 aa15.51■□□□□ 0.07
RPAIN-206ENST00000539417 PRAMEF33A0A0G2JMD5 474 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 GPR89AB7ZAQ6 455 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 GPR89BP0CG08 455 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 MLNP12872 115 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 BRAFP15056 766 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 ITGA8P53708 1063 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 DRG2P55039 364 aaKnown RBP15.5■□□□□ 0.07
RPAIN-206ENST00000539417 NFE2L1Q14494 772 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 SEPT7Q16181 437 aaKnown RBP15.5■□□□□ 0.07
RPAIN-206ENST00000539417 SYDE1Q6ZW31 735 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-206ENST00000539417 NLRP9Q7RTR0 991 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF572Q7Z3I7 529 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-206ENST00000539417 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 OR4L1Q8NH43 312 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 SLC37A2Q8TED4 501 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 ULK4Q96C45 1275 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 CCDC3Q9BQI4 270 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 WDR83Q9BRX9 315 aaKnown RBP15.5■□□□□ 0.07
RPAIN-206ENST00000539417 TIMM29Q9BSF4 260 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 SCNM1Q9BWG6 230 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 FAM8A1Q9UBU6 413 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 WDR37Q9Y2I8 494 aa15.5■□□□□ 0.07
RPAIN-206ENST00000539417 PPM1DO15297 605 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 ATP1B2P14415 290 aaPredicted RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 RPL10P27635 214 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 PRAMEP78395 509 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 SARNPP82979 210 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 DHX9Q08211 1270 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 LAMB3Q13751 1172 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 DHX34Q14147 1143 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 TRADDQ15628 312 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 CASC4Q6P4E1 433 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 AFTPHQ6ULP2 937 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF761Q86XN6 746 aaPredicted RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 Q8N9G6 341 aaPredicted RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 GLMNQ92990 594 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 RUNDC3BQ96NL0 473 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 ZCCHC2Q9C0B9 1178 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 MRM3Q9HC36 420 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 XAB2Q9HCS7 855 aaKnown RBP15.49■□□□□ 0.07
RPAIN-206ENST00000539417 LRIT1Q9P2V4 623 aa15.49■□□□□ 0.07
RPAIN-206ENST00000539417 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 SDR42E2A6NKP2 422 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 EFCAB8A8MWE9 144 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 OPA1O60313 960 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 SEC31AO94979 1220 aaKnown RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 VAPBO95292 243 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 ARCN1P48444 511 aaKnown RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 RPIAP49247 311 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 DUSP3P51452 185 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 CLCNKAP51800 687 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 CCL7P80098 99 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 CLCA4Q14CN2 919 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF658BQ4V348 819 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 BCL7AQ4VC05 210 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 HP1BP3Q5SSJ5 553 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 HES3Q5TGS1 186 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 IYDQ6PHW0 289 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 NAPRTQ6XQN6 538 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 SPNS2Q8IVW8 549 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 UNC5BQ8IZJ1 945 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 SFRP1Q8N474 314 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 PEX13Q92968 403 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF669Q96BR6 464 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 DPH5Q9H2P9 285 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 PLAC1Q9HBJ0 212 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 ZNF624Q9P2J8 865 aaPredicted RBP15.48■□□□□ 0.07
RPAIN-206ENST00000539417 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
RPAIN-206ENST00000539417 A0A1W2PQM1 296 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 AP3B1O00203 1094 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 CD3EAPO15446 510 aaKnown RBP15.47■□□□□ 0.07
RPAIN-206ENST00000539417 B4GAT1O43505 415 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 GP1BAP07359 652 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 F3P13726 295 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 GLB1P16278 677 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 PRLHRP49683 370 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 ILKQ13418 452 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 ANKRD20A4Q4UJ75 823 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 TMPRSS7Q7RTY8 843 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 HOOK3Q86VS8 718 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 AMZ2Q86W34 360 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 MAPK15Q8TD08 544 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 LKAAEAR1Q8TD35 194 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 DCUN1D1Q96GG9 259 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 SNF8Q96H20 258 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 SGSM3Q96HU1 749 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 CATSPERZQ9NTU4 200 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 NCKIPSDQ9NZQ3 722 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 PSMD13Q9UNM6 376 aa15.47■□□□□ 0.07
RPAIN-206ENST00000539417 FAM237BA0A1B0GVD1 139 aa15.46■□□□□ 0.07
RPAIN-206ENST00000539417 FAM187AA6NFU0 413 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms