RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 EPN2O95208 641 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 PKMP14618 531 aaKnown RBP23.17■■□□□ 1.3
TMEM260-202ENST00000538838 C21orf59P57076 290 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 EIF2B5Q13144 721 aaKnown RBP23.17■■□□□ 1.3
TMEM260-202ENST00000538838 ALG11Q2TAA5 492 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 PLA2G4EQ3MJ16 856 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF547Q8IVP9 402 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 KRT222Q8N1A0 295 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 AARSD1Q9BTE6 412 aaKnown RBP23.17■■□□□ 1.3
TMEM260-202ENST00000538838 CCDC68Q9H2F9 335 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 SLC24A2Q9UI40 661 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 ZFC3H1O60293 1989 aaKnown RBP23.17■■□□□ 1.3
TMEM260-202ENST00000538838 LAMA1P25391 3075 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 FRYLO94915 3013 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 CACNA1EQ15878 2313 aa23.17■■□□□ 1.3
TMEM260-202ENST00000538838 FAM95CA0A1B0GW59 222 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 GPR89AB7ZAQ6 455 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 AP2A2O94973 939 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ITGA2BP08514 1039 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 OR56A5P0C7T3 313 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 GPR89BP0CG08 455 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ITGB6P18564 788 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 SPRP35270 261 aaPredicted RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 HOXD12P35452 270 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 GNPDA1P46926 289 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 PRLHRP49683 370 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 SRP54P61011 504 aaKnown RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF844Q08AG5 666 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 BCL7AQ4VC05 210 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF542PQ5EBM4 170 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 RD3Q7Z3Z2 195 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 PARGQ86W56 976 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 FAM136AQ96C01 138 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 LOXL4Q96JB6 756 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ELMO2Q96JJ3 720 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 CARS2Q9HA77 564 aaKnown RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 FAM86C1Q9NVL1 165 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 PSMC3IPQ9P2W1 217 aaPredicted RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ZNHIT2Q9UHR6 403 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF180Q9UJW8 692 aa23.16■■□□□ 1.3
TMEM260-202ENST00000538838 CORO1CQ9ULV4 474 aaPredicted RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 MTO1Q9Y2Z2 717 aaKnown RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 TDRD6O60522 2096 aaKnown RBP23.16■■□□□ 1.3
TMEM260-202ENST00000538838 TNFRSF10CO14798 259 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 GRID2O43424 1007 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 MAGEC1O60732 1142 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 TCEA3O75764 348 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 CFIP05156 583 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 PBLDP30039 288 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-202ENST00000538838 DPP6P42658 865 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 ADGRD1Q6QNK2 874 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 LRRTM4Q86VH4 590 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 GALNT13Q8IUC8 556 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 ATOH1Q92858 354 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-202ENST00000538838 SKA1Q96BD8 255 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 SCARF2Q96GP6 870 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-202ENST00000538838 GPR22Q99680 433 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 RMI1Q9H9A7 625 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 TM7SF3Q9NS93 570 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 TBK1Q9UHD2 729 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 ANKRD6Q9Y2G4 727 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 PCDH15Q96QU1 1955 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 MUC6Q6W4X9 2439 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 HMX2A2RU54 273 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 PATE3B3GLJ2 98 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 SERPINB9P50453 376 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 BNC1Q01954 994 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 DUOXA1Q1HG43 343 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 PYCR3Q53H96 274 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 MROH9Q5TGP6 573 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 HECTD2Q5U5R9 776 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 HDXQ7Z353 690 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 HID1Q8IV36 788 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 SPNS2Q8IVW8 549 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 ZNF514Q96K75 400 aaPredicted RBP23.15■■□□□ 1.3
TMEM260-202ENST00000538838 ARRDC1-AS1Q9H2J1 176 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 PPCSQ9HAB8 311 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 FSCN3Q9NQT6 498 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 KLF15Q9UIH9 416 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 GPR34Q9UPC5 381 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 MED16Q9Y2X0 877 aa23.15■■□□□ 1.3
TMEM260-202ENST00000538838 TLDC2A0PJX2 215 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 RASGRF2O14827 1237 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 TRIM16O95361 564 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 SAT1P21673 171 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 MPLP40238 635 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 PGGT1BP53609 377 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 CDKN2DP55273 166 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 PPARDQ03181 441 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 TMED2Q15363 201 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 TCEA2Q15560 299 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 CCDC6Q16204 474 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 KIF19Q2TAC6 998 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 LAIR1Q6GTX8 287 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 FAM45BPQ6NSW5 357 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 TAOK1Q7L7X3 1001 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 C11orf96Q7Z7L8 435 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 PIM3Q86V86 326 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 TDRPQ86YL5 185 aa23.14■■□□□ 1.29
TMEM260-202ENST00000538838 DCLK2Q8N568 766 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms