RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CCNFP41002 786 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CDK3Q00526 305 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 B4GALNT1Q00973 533 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 AGERQ15109 404 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 TNFAIP8L3Q5GJ75 292 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CEP97Q8IW35 865 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 DEFB119Q8N690 84 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CLDN19Q8N6F1 224 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 ANKRD42Q8N9B4 389 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 SUMF1Q8NBK3 374 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 DENND6BQ8NEG7 585 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 HEXDCQ8WVB3 486 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 APOPT1Q96IL0 206 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 IQCGQ9H095 443 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 PHPT1Q9NRX4 125 aaPredicted RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 TRMT6Q9UJA5 497 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 TLK1Q9UKI8 766 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 CDV3Q9UKY7 258 aaKnown RBP13.97□□□□□ -0.17
CD4-208ENST00000538827 OR1A2Q9Y585 309 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 COMMD10Q9Y6G5 202 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 BPTFQ12830 3046 aa13.97□□□□□ -0.17
CD4-208ENST00000538827 GPR179Q6PRD1 2367 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 IGLV3-16A0A075B6K0 115 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 OR2AG2A6NM03 316 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 IQCF5A8MTL0 148 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 H3BMM5 538 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 FPGTO14772 594 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 MAP3K13O43283 966 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 OR56A5P0C7T3 313 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 SP9P0CG40 484 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 ATP1B2P14415 290 aaPredicted RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 MAGEA12P43365 314 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 FNTBP49356 437 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 CCR5P51681 352 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 CLDN2P57739 230 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 IRF9Q00978 393 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 INPP5AQ14642 412 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 USP39Q53GS9 565 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 PPM1JQ5JR12 505 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 CRTC3Q6UUV7 619 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 TIFABQ6ZNK6 161 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 MTERF4Q7Z6M4 381 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 NLRP8Q86W28 1048 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 SPNS2Q8IVW8 549 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 FAM76AQ8TAV0 307 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 MGARPQ8TDB4 240 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 ASB12Q8WXK4 309 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 ISL2Q96A47 359 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 CABS1Q96KC9 395 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 BIRC8Q96P09 236 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 GPR21Q99679 349 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 TSSK1BQ9BXA7 367 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 SLC13A1Q9BZW2 595 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 OR2AG1Q9H205 316 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 GPAMQ9HCL2 828 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 PRMT8Q9NR22 394 aaPredicted RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 TAS2R13Q9NYV9 303 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 FAM8A1Q9UBU6 413 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 CNOT6Q9ULM6 557 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 TMEM98Q9Y2Y6 226 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 VWA7Q9Y334 891 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 ACTL7BQ9Y614 415 aa13.96□□□□□ -0.17
CD4-208ENST00000538827 OAS3Q9Y6K5 1087 aaKnown RBP13.96□□□□□ -0.17
CD4-208ENST00000538827 A0A087X1B8 175 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 F8W8V4 182 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 CACNB4O00305 520 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 GLRA3O75311 464 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 IGHV4-34P06331 123 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 C2P06681 752 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 BCKDHBP21953 392 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 TEAD1P28347 426 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 CRABP2P29373 138 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 POLD2P49005 469 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 ATP1A2P50993 1020 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 ADARP55265 1226 aaKnown RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 PPP2R2AP63151 447 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 CSTF1Q05048 431 aaKnown RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 ZKSCAN8Q15776 578 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 SEPT7Q16181 437 aaKnown RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 UGT3A1Q6NUS8 523 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 MACC1Q6ZN28 852 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 TBC1D1Q86TI0 1168 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 TRAPPC5Q8IUR0 188 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 RASGEF1AQ8N9B8 481 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 ACMSDQ8TDX5 336 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 KCTD4Q8WVF5 259 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 FOXJ1Q92949 421 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 CENPTQ96BT3 561 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 SCYL1Q96KG9 808 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 PANX3Q96QZ0 392 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms