RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ZNF517Q6ZMY9 492 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 PRSS42Q7Z5A4 293 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 COMMD7Q86VX2 200 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PLD3Q8IV08 490 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC9A9Q8IVB4 645 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 NPAS3Q8IXF0 933 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PPIL6Q8IXY8 311 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RGL4Q8IZJ4 473 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZNF444Q8N0Y2 327 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 LNX2Q8N448 690 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ACVR1CQ8NER5 493 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GRPEL2Q8TAA5 225 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HMGCLL1Q8TB92 370 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 NANPQ8TBE9 248 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 URGCPQ8TCY9 931 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RASSF5Q8WWW0 418 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 S100ZQ8WXG8 99 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CDKL2Q92772 493 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RBM14Q96PK6 669 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLITRK1Q96PX8 696 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TRNT1Q96Q11 434 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ASB2Q96Q27 587 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GFM1Q96RP9 751 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ACOX2Q99424 681 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SPOCK3Q9BQ16 436 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 C19orf43Q9BQ61 176 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TRIM15Q9C019 465 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RAB6CQ9H0N0 254 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PPIL3Q9H2H8 161 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 TTYH1Q9H313 450 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZNF768Q9H5H4 540 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ESRP2Q9H6T0 727 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZFP14Q9HCL3 533 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 IFT46Q9NQC8 304 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 COL20A1Q9P218 1284 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 UTS2RQ9UKP6 389 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CDV3Q9UKY7 258 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 CNOT11Q9UKZ1 510 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 TBC1D24Q9ULP9 559 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PRPF19Q9UMS4 504 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 MINPP1Q9UNW1 487 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC22A7Q9Y694 548 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CACNG2Q9Y698 323 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CDK5RAP2Q96SN8 1893 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TANC1Q9C0D5 1861 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 A0A1W2PP18 115 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HEATR9A2RTY3 570 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SMIM30A4D0T7 59 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TRPC5OSA6NMA1 111 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SCAMP2O15127 329 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 INPP4BO15327 924 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FAM189A1O60320 539 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PTP4A3O75365 173 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PMPCBO75439 489 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KRT37O76014 449 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RECQL5O94762 991 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 IFNA14P01570 189 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LCKP06239 509 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 YES1P07947 543 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CYP3A4P08684 503 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CYP4B1P13584 511 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CYP3A5P20815 502 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GLDCP23378 1020 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC7A1P30825 629 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TALDO1P37837 337 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 IL12RB1P42701 662 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RFX2P48378 723 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 MFAP3P55082 362 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 HADHBP55084 474 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 NKX3-2P78367 333 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 OGDHQ02218 1023 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TEKQ02763 1124 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 PLEKHG6Q3KR16 790 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 C5orf22Q49AR2 442 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 LAIR1Q6GTX8 287 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GLYATQ6IB77 296 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CHMP1BQ7LBR1 199 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC16A13Q7RTY0 426 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SNX20Q7Z614 316 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 FAM160B2Q86V87 743 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CAMK1DQ8IU85 385 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 DMRTC2Q8IXT2 367 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 SFRP1Q8N474 314 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KDM1BQ8NB78 822 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 RSAD2Q8WXG1 361 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SEPT8Q92599 483 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 UBE2FQ969M7 185 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 ASB9Q96DX5 294 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 KLHL15Q96M94 604 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 Q96MT0 163 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 GPR78Q96P69 363 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SECISBP2Q96T21 854 aaKnown RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 ZIC5Q96T25 663 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SDHCQ99643 169 aaPredicted RBP3.69□□□□□ -1.82
MCF2-210ENST00000536274 MYOCQ99972 504 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 CBWD1Q9BRT8 395 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 TEX13BQ9BXU2 312 aa3.69□□□□□ -1.82
MCF2-210ENST00000536274 SLC6A17Q9H1V8 727 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms