RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 AARS2Q5JTZ9 985 aaKnown RBP13.35□□□□□ -0.27
RPAIN-205ENST00000536255 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
RPAIN-205ENST00000536255 PERM1Q5SV97 790 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 CERS6Q6ZMG9 384 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 MMGT1Q8N4V1 131 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 DCBLD1Q8N8Z6 715 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 GPR156Q8NFN8 814 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 MAPK15Q8TD08 544 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 ZNF778Q96MU6 729 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 NAT9Q9BTE0 207 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 DPEP2Q9H4A9 486 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 ZDHHC3Q9NYG2 299 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 SLC2A6Q9UGQ3 507 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
RPAIN-205ENST00000536255 F8W8V4 182 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 PFDN6O15212 129 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 NOBOXO60393 691 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 KCNJ13O60928 360 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 TTC4O95801 387 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 GOT2P00505 430 aaKnown RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 NMBRP28336 390 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 FOXN2P32314 431 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CTBSQ01459 385 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CAV1Q03135 178 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 ITIH4Q14624 930 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 ZNF648Q5T619 568 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 SLC30A9Q6PML9 568 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CHST15Q7LFX5 561 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 SERPINA9Q86WD7 417 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 TRAPPC5Q8IUR0 188 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 LRRC39Q96DD0 335 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 MFSD3Q96ES6 412 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 SPATS2LQ9NUQ6 558 aaKnown RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 TAAR2Q9P1P5 351 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 ST14Q9Y5Y6 855 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-205ENST00000536255 RPS6KL1Q9Y6S9 549 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 WDFY3Q8IZQ1 3526 aa13.34□□□□□ -0.27
RPAIN-205ENST00000536255 ZNF106Q9H2Y7 1883 aaKnown RBP13.33□□□□□ -0.27
RPAIN-205ENST00000536255 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
RPAIN-205ENST00000536255 PLXNB3Q9ULL4 1909 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 KLHL33A6NCF5 533 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 OR51F1A6NGY5 319 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ESPNB1AK53 854 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 QSOX1O00391 747 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 USP1O94782 785 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 MT-CO3P00414 261 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 POLBP06746 335 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 PGAM1P18669 254 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ACTR1BP42025 376 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 NSG1P42857 185 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 DRG2P55039 364 aaKnown RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ACTR1AP61163 376 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ST3GAL2Q16842 350 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 INSCQ1MX18 579 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 KHDC1Q4VXA5 237 aaKnown RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 MRNIPQ6NTE8 343 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 TMEM220Q6QAJ8 160 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 CRTC3Q6UUV7 619 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 SDCCAG8Q86SQ7 713 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 TMEM135Q86UB9 458 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 SFTPA2Q8IWL1 248 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 GABPB2Q8TAK5 448 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ZDHHC1Q8WTX9 485 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 CCDC74AQ96AQ1 378 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF669Q96BR6 464 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-205ENST00000536255 SIGLEC10Q96LC7 697 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 TIMM29Q9BSF4 260 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 VPS37BQ9H9H4 285 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 PRKAB1Q9Y478 270 aa13.33□□□□□ -0.28
RPAIN-205ENST00000536255 PCYT1BQ9Y5K3 369 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms