RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 DNAJC16Q9Y2G8 782 aa12□□□□□ -0.49
CCND1-202ENST00000535993 TMEM184BQ9Y519 407 aaPredicted RBP12□□□□□ -0.49
CCND1-202ENST00000535993 PCDHA3Q9Y5H8 950 aa12□□□□□ -0.49
CCND1-202ENST00000535993 MN1Q10571 1320 aaPredicted RBP12□□□□□ -0.49
CCND1-202ENST00000535993 BOD1L1Q8NFC6 3051 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 SUV39H1O43463 412 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 KCNJ13O60928 360 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 MTX2O75431 263 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 STK17BO94768 372 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 EPOP01588 193 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 C9P02748 559 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 TYRP1P17643 537 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 PTPN7P35236 360 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 HMGCLP35914 325 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 SLC19A1P41440 591 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 POLE2P56282 527 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 FOXM1Q08050 763 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 MAP7Q14244 749 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 PRKD1Q15139 912 aaPredicted RBP11.99□□□□□ -0.49
CCND1-202ENST00000535993 SEPT7Q16181 437 aaKnown RBP11.99□□□□□ -0.49
CCND1-202ENST00000535993 PPP2R5EQ16537 467 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 TFDP3Q5H9I0 405 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 FAM182AQ5T1J6 154 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 AGAP9Q5VTM2 703 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 ABRAXAS1Q6UWZ7 409 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 WASH2PQ6VEQ5 465 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 SPOCD1Q6ZMY3 1216 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 RCOR2Q8IZ40 523 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 RNF10Q8N5U6 811 aaKnown RBP11.99□□□□□ -0.49
CCND1-202ENST00000535993 ESX1Q8N693 406 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 GDAP1Q8TB36 358 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 BRSK1Q8TDC3 778 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 ALG3Q92685 438 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 C9orf72Q96LT7 481 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 TTC25Q96NG3 672 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 ZCCHC2Q9C0B9 1178 aaKnown RBP11.99□□□□□ -0.49
CCND1-202ENST00000535993 BPIFA1Q9NP55 256 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 WASH6PQ9NQA3 447 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 UBP1Q9NZI7 540 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCND1-202ENST00000535993 SLC23A2Q9UGH3 650 aa11.99□□□□□ -0.49
CCND1-202ENST00000535993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCND1-202ENST00000535993 LOC101059948A0A1B0GTJ6 334 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 LOC285095A0A1B0GVY8 99 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 MACROD2A1Z1Q3 448 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 CCDC66A2RUB6 948 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 NKX2-8O15522 239 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 CST8O60676 142 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ZRANB2O95218 330 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCND1-202ENST00000535993 RPL10P27635 214 aaKnown RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 GFERP55789 205 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 WNT3AP56704 352 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 COPS2P61201 443 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 NFKB2Q00653 900 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 TMEM115Q12893 351 aaPredicted RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 KCNAB2Q13303 367 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 KAZNQ674X7 775 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 B4GALNT4Q76KP1 1039 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 TRAPPC5Q8IUR0 188 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ZNF547Q8IVP9 402 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 DTX3LQ8TDB6 740 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ANP32BQ92688 251 aaKnown RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 P3H4Q92791 437 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 CXorf40BQ96DE9 158 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ZDHHC12Q96GR4 267 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 RBM41Q96IZ5 413 aaKnown RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 TGM7Q96PF1 710 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 VAT1Q99536 393 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 ULBP3Q9BZM4 244 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 TRIM4Q9C037 500 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 APMAPQ9HDC9 416 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 SLC40A1Q9NP59 571 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 HACD3Q9P035 362 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 KLHL8Q9P2G9 620 aaPredicted RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 ZNF624Q9P2J8 865 aaPredicted RBP11.98□□□□□ -0.49
CCND1-202ENST00000535993 EFR3BQ9Y2G0 817 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 SPO11Q9Y5K1 396 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 SLC30A1Q9Y6M5 507 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 CAPN6Q9Y6Q1 641 aa11.98□□□□□ -0.49
CCND1-202ENST00000535993 PRR19A6NJB7 356 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 AURKAO14965 403 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 RASSF9O75901 435 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 DLGAP3O95886 979 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 PRKAR1AP10644 381 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 NFKB1P19838 968 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 CD68P34810 354 aaPredicted RBP11.97□□□□□ -0.49
CCND1-202ENST00000535993 SPAM1P38567 509 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 HALP42357 657 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 CAPZBP47756 277 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 SEPHS1P49903 392 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 DRG2P55039 364 aaKnown RBP11.97□□□□□ -0.49
CCND1-202ENST00000535993 WASHC5Q12768 1159 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 CDC20Q12834 499 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 IL11RAQ14626 422 aa11.97□□□□□ -0.49
CCND1-202ENST00000535993 KHDC1Q4VXA5 237 aaKnown RBP11.97□□□□□ -0.49
CCND1-202ENST00000535993 CYB5D1Q6P9G0 228 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms