RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 OR13F1Q8NGS4 319 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 LINC01599Q8WXQ3 324 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 LPGAT1Q92604 370 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 FBXL20Q96IG2 436 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 GLT1D1Q96MS3 346 aa17.77■□□□□ 0.44
RAB40C-203ENST00000535977 AARSD1Q9BTE6 412 aaKnown RBP17.77■□□□□ 0.44
RAB40C-203ENST00000535977 CLOCKO15516 846 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 NRP2O60462 931 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 ALDH1A1P00352 501 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 NR4A2P43354 598 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 MERTKQ12866 999 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 SAMD4BQ5PRF9 694 aaKnown RBP17.77■□□□□ 0.43
RAB40C-203ENST00000535977 ANKRD13BQ86YJ7 626 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 OR7G1Q8NGA0 311 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 C19orf60Q96EN9 201 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 DUS3LQ96G46 650 aaKnown RBP17.77■□□□□ 0.43
RAB40C-203ENST00000535977 MGME1Q9BQP7 344 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 TP63Q9H3D4 680 aaPredicted RBP17.77■□□□□ 0.43
RAB40C-203ENST00000535977 VPS9D1Q9Y2B5 631 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 KCTD3Q9Y597 815 aa17.77■□□□□ 0.43
RAB40C-203ENST00000535977 MTMR11A4FU01 709 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ZNF839A8K0R7 811 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 TRIM24O15164 1050 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 VPS4BO75351 444 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 HMBSP08397 361 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 POLR2IP36954 125 aaKnown RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ACVRL1P37023 503 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 STC1P52823 247 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 RNF19BQ6ZMZ0 732 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 OFCC1Q8IZS5 231 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ELMOD1Q8N336 334 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CLIP4Q8N3C7 705 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 MFSD2AQ8NA29 543 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 MINDY2Q8NBR6 621 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ZIC5Q96T25 663 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CSF3RQ99062 836 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 SCUBE2Q9NQ36 999 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CCDC167Q9P0B6 97 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 PSME2Q9UL46 239 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 UBFD1O14562 309 aaKnown RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ZNF37AP17032 561 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 RALGDSQ12967 914 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 UGT3A2Q3SY77 523 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ZNF549Q6P9A3 640 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 LDB1Q86U70 411 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ANKK1Q8NFD2 765 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CYGBQ8WWM9 190 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CYP2S1Q96SQ9 504 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 TNFRSF12AQ9NP84 129 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 PCDH12Q9NPG4 1184 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 NLE1Q9NVX2 485 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 MTF2Q9Y483 593 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-203ENST00000535977 ARL5AQ9Y689 179 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 TLL2Q9Y6L7 1015 aa17.76■□□□□ 0.43
RAB40C-203ENST00000535977 CASP8AP2Q9UKL3 1982 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TCRBV3S1A0A5B6 114 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 OR51F1A6NGY5 319 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 E7ENX8 843 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 MRASO14807 208 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TLR5O60602 858 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 PSMA3P25788 255 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 BMPR1AP36894 532 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 KCNC1P48547 511 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 RAD23AP54725 363 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 ATP6V0D1P61421 351 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 BFSP2Q13515 415 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SLC36A3Q495N2 470 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 NADSYN1Q6IA69 706 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 LGI2Q8N0V4 545 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SIX5Q8N196 739 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TTC9BQ8N6N2 239 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 BPIFB6Q8NFQ5 453 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 HMGCLL1Q8TB92 370 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 STAG3L4Q8TBR4 150 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 GPR152Q8TDT2 470 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 PTERQ96BW5 349 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 EFHD1Q9BUP0 239 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 HOXD1Q9GZZ0 328 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 RAD21L1Q9H4I0 556 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 DNMT3LQ9UJW3 386 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TTC24A2A3L6 582 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SRP72O76094 671 aaKnown RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SLC4A1P02730 911 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 BMP2P12643 396 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 EEF1DP29692 281 aaKnown RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SLC11A2P49281 568 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 CDH4P55283 916 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 MBTPS1Q14703 1052 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 AFTPHQ6ULP2 937 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 KIAA1191Q96A73 305 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 CDKN2AIPNLQ96HQ2 116 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 CNDP2Q96KP4 475 aaKnown RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 PSKH2Q96QS6 385 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TRIB3Q96RU7 358 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 SEPT5Q99719 369 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TUBA1CQ9BQE3 449 aa17.75■□□□□ 0.43
RAB40C-203ENST00000535977 TTLL2Q9BWV7 592 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms