RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PCDHB1Q9Y5F3 818 aa15.37■□□□□ 0.05
CNN1-202ENST00000535659 DNMT3AQ9Y6K1 912 aaPredicted RBP15.37■□□□□ 0.05
CNN1-202ENST00000535659 DNAH14Q0VDD8 3507 aa15.37■□□□□ 0.05
CNN1-202ENST00000535659 F8W8V4 182 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 QSOX1O00391 747 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 ARHGAP33O14559 1287 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 KMOO15229 486 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 SGTAO43765 313 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 ESR1P03372 595 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 CSF2P04141 144 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 SYPP08247 313 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 OR56A5P0C7T3 313 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 GNPDA1P46926 289 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 EIF3BP55884 814 aaKnown RBP15.36■□□□□ 0.05
CNN1-202ENST00000535659 EFTUD2Q15029 972 aaKnown RBP eCLIP15.36■□□□□ 0.05
CNN1-202ENST00000535659 ZNF542PQ5EBM4 170 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 GRTP1Q5TC63 336 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 LRRTM4Q86VH4 590 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 GALNT13Q8IUC8 556 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 ZNF547Q8IVP9 402 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 PDXPQ96GD0 296 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 DNAJC28Q9NX36 388 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 PRKAB1Q9Y478 270 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 GPSM3Q9Y4H4 160 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 PCYT1BQ9Y5K3 369 aaPredicted RBP15.36■□□□□ 0.05
CNN1-202ENST00000535659 LAMA1P25391 3075 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 PLXNB3Q9ULL4 1909 aa15.36■□□□□ 0.05
CNN1-202ENST00000535659 PROB1E7EW31 1015 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 POP7O75817 140 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 ZNF806P0C7X5 589 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 PKMP14618 531 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 NME1P15531 152 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 JUNDP17535 347 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 CD151P48509 253 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 CSE1LP55060 971 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 ILF2Q12905 390 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 GRIK2Q13002 908 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 HLA-BQ31612 363 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 BCL7AQ4VC05 210 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 BEND6Q5SZJ8 279 aaPredicted RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 PTRHD1Q6GMV3 140 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 ZNF549Q6P9A3 640 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 IL27RAQ6UWB1 636 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 TRAPPC5Q8IUR0 188 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 MRRFQ96E11 262 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 SLC13A1Q9BZW2 595 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 CCDC68Q9H2F9 335 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 SMOC1Q9H4F8 434 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 FSCN3Q9NQT6 498 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 TRNAU1APQ9NX07 287 aaKnown RBP15.35■□□□□ 0.05
CNN1-202ENST00000535659 GNPTGQ9UJJ9 305 aa15.35■□□□□ 0.05
CNN1-202ENST00000535659 EXOC1LA0A1B0GW35 172 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 POC1B-GALNT4F8VUJ3 575 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 H3BMM5 538 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 DFNA5O60443 496 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 CTSEP14091 401 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 GP5P40197 560 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 MSH2P43246 934 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 RXRGP48443 463 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 ARRB1P49407 418 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 PRLHRP49683 370 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 HNRNPKP61978 463 aaKnown RBP eCLIP15.34■□□□□ 0.05
CNN1-202ENST00000535659 ZNF423Q2M1K9 1284 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 CTSL3PQ5NE16 218 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 CRTC3Q6UUV7 619 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 CHST15Q7LFX5 561 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 C11orf96Q7Z7L8 435 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 OXR1Q8N573 874 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 BEND7Q8N7W2 519 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 SLC44A1Q8WWI5 657 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 LINC00615Q96LM1 132 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 ELF4Q99607 663 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 CCM2Q9BSQ5 444 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 MCMBPQ9BTE3 642 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 TCEAL2Q9H3H9 227 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 RHOJQ9H4E5 214 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 TM7SF3Q9NS93 570 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 ARGLU1Q9NWB6 273 aaPredicted RBP15.34■□□□□ 0.05
CNN1-202ENST00000535659 NCDNQ9UBB6 729 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 COMMD10Q9Y6G5 202 aa15.34■□□□□ 0.05
CNN1-202ENST00000535659 C17orf113A0A1B0GUU1 675 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 SCAMP1O15126 338 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 KCNJ13O60928 360 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 FAM155BO75949 473 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 FTH1P02794 183 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 SHBGP04278 402 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 NUDT17P0C025 328 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 CHRM3P20309 590 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 SPRP35270 261 aaPredicted RBP15.33■□□□□ 0.05
CNN1-202ENST00000535659 ABCG1P45844 678 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 SPEM2Q0P670 501 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 AMZ2Q86W34 360 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 OR2M4Q96R27 311 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 PAFAH2Q99487 392 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 RBBP8Q99708 897 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 AARSD1Q9BTE6 412 aaKnown RBP15.33■□□□□ 0.05
CNN1-202ENST00000535659 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.05
CNN1-202ENST00000535659 GAREM1Q9H706 876 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms